Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn4bQ7M729 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.21■□□□□ 0.67
Scn4bQ7M729 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.21■□□□□ 0.67
Scn4bQ7M729 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.21■□□□□ 0.67
Scn4bQ7M729 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn4bQ7M729 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn4bQ7M729 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn4bQ7M729 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn4bQ7M729 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn4bQ7M729 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn4bQ7M729 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn4bQ7M729 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn4bQ7M729 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn4bQ7M729 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn4bQ7M729 Gm13241-201ENSMUST00000094493 780 ntBASIC19.19■□□□□ 0.66
Scn4bQ7M729 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn4bQ7M729 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn4bQ7M729 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Scn4bQ7M729 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Scn4bQ7M729 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn4bQ7M729 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scn4bQ7M729 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Golph3-202ENSMUST00000226517 2359 ntBASIC19.17■□□□□ 0.66
Scn4bQ7M729 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.17■□□□□ 0.66
Scn4bQ7M729 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn4bQ7M729 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn4bQ7M729 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.15■□□□□ 0.66
Scn4bQ7M729 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn4bQ7M729 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn4bQ7M729 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn4bQ7M729 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn4bQ7M729 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.14■□□□□ 0.65
Scn4bQ7M729 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn4bQ7M729 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Scn4bQ7M729 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn4bQ7M729 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn4bQ7M729 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn4bQ7M729 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn4bQ7M729 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn4bQ7M729 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms