Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim45Q6PFY8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Gm6139-201ENSMUST00000079261 882 ntBASIC18.55■□□□□ 0.56
Trim45Q6PFY8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.55■□□□□ 0.56
Trim45Q6PFY8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim45Q6PFY8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim45Q6PFY8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim45Q6PFY8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim45Q6PFY8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trim45Q6PFY8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim45Q6PFY8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Trim45Q6PFY8 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.52■□□□□ 0.56
Trim45Q6PFY8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim45Q6PFY8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim45Q6PFY8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim45Q6PFY8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim45Q6PFY8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim45Q6PFY8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim45Q6PFY8 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.52■□□□□ 0.55
Trim45Q6PFY8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim45Q6PFY8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim45Q6PFY8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim45Q6PFY8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim45Q6PFY8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim45Q6PFY8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim45Q6PFY8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim45Q6PFY8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Mir7075-201ENSMUST00000184187 82 ntBASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim45Q6PFY8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim45Q6PFY8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim45Q6PFY8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim45Q6PFY8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim45Q6PFY8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim45Q6PFY8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim45Q6PFY8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim45Q6PFY8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms