Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.29■□□□□ 0.68
Rai1Q61818 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rai1Q61818 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rai1Q61818 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rai1Q61818 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.29■□□□□ 0.68
Rai1Q61818 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rai1Q61818 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.29■□□□□ 0.68
Rai1Q61818 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rai1Q61818 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rai1Q61818 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rai1Q61818 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rai1Q61818 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rai1Q61818 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rai1Q61818 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rai1Q61818 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rai1Q61818 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rai1Q61818 Gm4968-201ENSMUST00000071458 858 ntBASIC19.28■□□□□ 0.68
Rai1Q61818 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rai1Q61818 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rai1Q61818 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rai1Q61818 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rai1Q61818 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Rai1Q61818 Gm13146-201ENSMUST00000118508 780 ntBASIC19.27■□□□□ 0.68
Rai1Q61818 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.27■□□□□ 0.68
Rai1Q61818 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rai1Q61818 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.27■□□□□ 0.68
Rai1Q61818 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rai1Q61818 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rai1Q61818 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rai1Q61818 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
Rai1Q61818 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rai1Q61818 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.26■□□□□ 0.67
Rai1Q61818 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.26■□□□□ 0.67
Rai1Q61818 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Rai1Q61818 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.26■□□□□ 0.67
Rai1Q61818 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.26■□□□□ 0.67
Rai1Q61818 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rai1Q61818 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rai1Q61818 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rai1Q61818 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rai1Q61818 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.25■□□□□ 0.67
Rai1Q61818 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rai1Q61818 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rai1Q61818 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rai1Q61818 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rai1Q61818 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rai1Q61818 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Rai1Q61818 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rai1Q61818 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rai1Q61818 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rai1Q61818 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.24■□□□□ 0.67
Rai1Q61818 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.24■□□□□ 0.67
Rai1Q61818 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rai1Q61818 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rai1Q61818 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rai1Q61818 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rai1Q61818 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rai1Q61818 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rai1Q61818 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rai1Q61818 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rai1Q61818 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rai1Q61818 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Rai1Q61818 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.23■□□□□ 0.67
Rai1Q61818 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Rai1Q61818 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rai1Q61818 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.23■□□□□ 0.67
Rai1Q61818 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rai1Q61818 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.22■□□□□ 0.67
Rai1Q61818 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rai1Q61818 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rai1Q61818 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rai1Q61818 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rai1Q61818 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rai1Q61818 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.22■□□□□ 0.67
Rai1Q61818 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rai1Q61818 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rai1Q61818 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rai1Q61818 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rai1Q61818 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.21■□□□□ 0.67
Rai1Q61818 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rai1Q61818 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rai1Q61818 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.2■□□□□ 0.66
Rai1Q61818 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.2■□□□□ 0.66
Rai1Q61818 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rai1Q61818 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rai1Q61818 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rai1Q61818 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rai1Q61818 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms