Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx4Q61496 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Ddx4Q61496 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Ddx4Q61496 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx4Q61496 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Ddx4Q61496 Gm13148-201ENSMUST00000118892 745 ntBASIC21.83■■□□□ 1.09
Ddx4Q61496 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx4Q61496 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ddx4Q61496 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx4Q61496 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.82■■□□□ 1.08
Ddx4Q61496 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx4Q61496 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ddx4Q61496 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx4Q61496 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.81■■□□□ 1.08
Ddx4Q61496 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Ddx4Q61496 Gm22325-201ENSMUST00000158904 308 ntBASIC21.81■■□□□ 1.08
Ddx4Q61496 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx4Q61496 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx4Q61496 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx4Q61496 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx4Q61496 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx4Q61496 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ddx4Q61496 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.8■■□□□ 1.08
Ddx4Q61496 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ddx4Q61496 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.8■■□□□ 1.08
Ddx4Q61496 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.8■■□□□ 1.08
Ddx4Q61496 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.8■■□□□ 1.08
Ddx4Q61496 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.8■■□□□ 1.08
Ddx4Q61496 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx4Q61496 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx4Q61496 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx4Q61496 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx4Q61496 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx4Q61496 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx4Q61496 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx4Q61496 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx4Q61496 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx4Q61496 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.78■■□□□ 1.08
Ddx4Q61496 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.78■■□□□ 1.08
Ddx4Q61496 Mir7071-201ENSMUST00000184847 69 ntBASIC21.78■■□□□ 1.08
Ddx4Q61496 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx4Q61496 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx4Q61496 Gm5408-201ENSMUST00000197998 747 ntBASIC21.77■■□□□ 1.08
Ddx4Q61496 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx4Q61496 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx4Q61496 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.77■■□□□ 1.08
Ddx4Q61496 Gm6365-201ENSMUST00000054711 744 ntBASIC21.77■■□□□ 1.08
Ddx4Q61496 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx4Q61496 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx4Q61496 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx4Q61496 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Ddx4Q61496 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ddx4Q61496 Gm7290-201ENSMUST00000104990 617 ntBASIC21.76■■□□□ 1.07
Ddx4Q61496 Gm12918-201ENSMUST00000120234 636 ntBASIC21.76■■□□□ 1.07
Ddx4Q61496 Gm13168-201ENSMUST00000121771 632 ntBASIC21.76■■□□□ 1.07
Ddx4Q61496 Gm15710-201ENSMUST00000121821 636 ntBASIC21.76■■□□□ 1.07
Ddx4Q61496 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.76■■□□□ 1.07
Ddx4Q61496 Gm5075-201ENSMUST00000196916 622 ntBASIC21.76■■□□□ 1.07
Ddx4Q61496 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.76■■□□□ 1.07
Ddx4Q61496 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.76■■□□□ 1.07
Ddx4Q61496 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx4Q61496 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx4Q61496 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.76■■□□□ 1.07
Ddx4Q61496 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.76■■□□□ 1.07
Ddx4Q61496 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx4Q61496 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx4Q61496 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx4Q61496 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx4Q61496 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx4Q61496 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.75■■□□□ 1.07
Ddx4Q61496 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.75■■□□□ 1.07
Ddx4Q61496 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx4Q61496 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.75■■□□□ 1.07
Ddx4Q61496 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx4Q61496 Gm38205-201ENSMUST00000192243 258 ntBASIC21.74■■□□□ 1.07
Ddx4Q61496 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ddx4Q61496 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ddx4Q61496 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx4Q61496 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx4Q61496 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx4Q61496 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx4Q61496 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx4Q61496 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx4Q61496 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx4Q61496 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx4Q61496 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx4Q61496 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ddx4Q61496 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms