Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn4Q61418 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn4Q61418 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn4Q61418 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn4Q61418 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn4Q61418 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Clcn4Q61418 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn4Q61418 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn4Q61418 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn4Q61418 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.07■□□□□ 0.48
Clcn4Q61418 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Clcn4Q61418 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clcn4Q61418 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn4Q61418 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn4Q61418 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn4Q61418 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
Clcn4Q61418 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.07■□□□□ 0.48
Clcn4Q61418 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn4Q61418 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.07■□□□□ 0.48
Clcn4Q61418 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Clcn4Q61418 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Clcn4Q61418 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn4Q61418 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn4Q61418 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn4Q61418 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn4Q61418 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Clcn4Q61418 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.06■□□□□ 0.48
Clcn4Q61418 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Clcn4Q61418 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Clcn4Q61418 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn4Q61418 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn4Q61418 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Clcn4Q61418 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.05■□□□□ 0.48
Clcn4Q61418 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn4Q61418 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn4Q61418 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn4Q61418 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Clcn4Q61418 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn4Q61418 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn4Q61418 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn4Q61418 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.04■□□□□ 0.48
Clcn4Q61418 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn4Q61418 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn4Q61418 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.04■□□□□ 0.48
Clcn4Q61418 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn4Q61418 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Clcn4Q61418 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn4Q61418 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Clcn4Q61418 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn4Q61418 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.04■□□□□ 0.48
Clcn4Q61418 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn4Q61418 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn4Q61418 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn4Q61418 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn4Q61418 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Clcn4Q61418 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn4Q61418 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn4Q61418 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn4Q61418 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.03■□□□□ 0.48
Clcn4Q61418 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.03■□□□□ 0.48
Clcn4Q61418 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn4Q61418 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn4Q61418 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn4Q61418 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn4Q61418 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn4Q61418 Gm21956-201ENSMUST00000179946 522 ntBASIC18.02■□□□□ 0.48
Clcn4Q61418 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.02■□□□□ 0.48
Clcn4Q61418 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.02■□□□□ 0.48
Clcn4Q61418 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.02■□□□□ 0.48
Clcn4Q61418 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.02■□□□□ 0.48
Clcn4Q61418 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn4Q61418 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn4Q61418 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
Clcn4Q61418 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn4Q61418 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn4Q61418 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn4Q61418 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Clcn4Q61418 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn4Q61418 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Clcn4Q61418 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn4Q61418 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn4Q61418 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn4Q61418 Gm12821-201ENSMUST00000120022 600 ntBASIC18.01■□□□□ 0.47
Clcn4Q61418 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.01■□□□□ 0.47
Clcn4Q61418 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.01■□□□□ 0.47
Clcn4Q61418 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn4Q61418 Gm9870-201ENSMUST00000063874 645 ntBASIC18.01■□□□□ 0.47
Clcn4Q61418 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn4Q61418 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn4Q61418 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clcn4Q61418 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms