Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sdf4Q61112 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.99■□□□□ 0.79
Sdf4Q61112 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sdf4Q61112 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sdf4Q61112 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Sdf4Q61112 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdf4Q61112 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdf4Q61112 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdf4Q61112 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
Sdf4Q61112 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sdf4Q61112 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.98■□□□□ 0.79
Sdf4Q61112 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.98■□□□□ 0.79
Sdf4Q61112 Gm43137-201ENSMUST00000198052 594 ntBASIC19.98■□□□□ 0.79
Sdf4Q61112 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdf4Q61112 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Sdf4Q61112 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sdf4Q61112 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdf4Q61112 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdf4Q61112 Gm12821-201ENSMUST00000120022 600 ntBASIC19.97■□□□□ 0.79
Sdf4Q61112 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.97■□□□□ 0.79
Sdf4Q61112 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdf4Q61112 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.97■□□□□ 0.79
Sdf4Q61112 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdf4Q61112 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdf4Q61112 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.96■□□□□ 0.79
Sdf4Q61112 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdf4Q61112 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.95■□□□□ 0.78
Sdf4Q61112 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.95■□□□□ 0.78
Sdf4Q61112 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.95■□□□□ 0.78
Sdf4Q61112 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Sdf4Q61112 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Sdf4Q61112 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sdf4Q61112 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sdf4Q61112 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.94■□□□□ 0.78
Sdf4Q61112 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdf4Q61112 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdf4Q61112 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdf4Q61112 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sdf4Q61112 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdf4Q61112 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdf4Q61112 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sdf4Q61112 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.94■□□□□ 0.78
Sdf4Q61112 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdf4Q61112 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sdf4Q61112 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdf4Q61112 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sdf4Q61112 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.93■□□□□ 0.78
Sdf4Q61112 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.93■□□□□ 0.78
Sdf4Q61112 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdf4Q61112 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdf4Q61112 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sdf4Q61112 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sdf4Q61112 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sdf4Q61112 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdf4Q61112 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdf4Q61112 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdf4Q61112 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdf4Q61112 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sdf4Q61112 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdf4Q61112 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdf4Q61112 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdf4Q61112 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sdf4Q61112 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sdf4Q61112 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Sdf4Q61112 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.92■□□□□ 0.78
Sdf4Q61112 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdf4Q61112 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdf4Q61112 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sdf4Q61112 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sdf4Q61112 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.91■□□□□ 0.78
Sdf4Q61112 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sdf4Q61112 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.91■□□□□ 0.78
Sdf4Q61112 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms