Protein–RNA interactions for Protein: Q61107

Gbp4, Guanylate-binding protein 4, mousemouse

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbp4Q61107 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.62■□□□□ 0.89
Gbp4Q61107 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gbp4Q61107 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gbp4Q61107 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.61■□□□□ 0.89
Gbp4Q61107 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gbp4Q61107 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.61■□□□□ 0.89
Gbp4Q61107 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gbp4Q61107 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gbp4Q61107 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gbp4Q61107 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gbp4Q61107 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.6■□□□□ 0.89
Gbp4Q61107 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gbp4Q61107 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Gbp4Q61107 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbp4Q61107 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbp4Q61107 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gbp4Q61107 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbp4Q61107 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbp4Q61107 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gbp4Q61107 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gbp4Q61107 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Gbp4Q61107 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.59■□□□□ 0.89
Gbp4Q61107 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbp4Q61107 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbp4Q61107 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbp4Q61107 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Gbp4Q61107 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gbp4Q61107 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.58■□□□□ 0.89
Gbp4Q61107 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gbp4Q61107 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gbp4Q61107 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gbp4Q61107 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.58■□□□□ 0.89
Gbp4Q61107 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.58■□□□□ 0.89
Gbp4Q61107 Gm5812-201ENSMUST00000061073 957 ntBASIC20.58■□□□□ 0.89
Gbp4Q61107 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gbp4Q61107 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gbp4Q61107 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gbp4Q61107 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gbp4Q61107 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gbp4Q61107 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.57■□□□□ 0.88
Gbp4Q61107 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.57■□□□□ 0.88
Gbp4Q61107 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gbp4Q61107 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gbp4Q61107 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gbp4Q61107 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gbp4Q61107 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gbp4Q61107 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gbp4Q61107 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gbp4Q61107 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gbp4Q61107 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gbp4Q61107 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gbp4Q61107 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gbp4Q61107 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Gbp4Q61107 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gbp4Q61107 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Gbp4Q61107 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.56■□□□□ 0.88
Gbp4Q61107 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gbp4Q61107 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gbp4Q61107 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gbp4Q61107 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gbp4Q61107 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gbp4Q61107 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gbp4Q61107 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gbp4Q61107 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.55■□□□□ 0.88
Gbp4Q61107 Gm40881-201ENSMUST00000223397 166 ntBASIC20.55■□□□□ 0.88
Gbp4Q61107 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gbp4Q61107 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gbp4Q61107 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gbp4Q61107 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gbp4Q61107 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gbp4Q61107 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.55■□□□□ 0.88
Gbp4Q61107 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gbp4Q61107 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Gbp4Q61107 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gbp4Q61107 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gbp4Q61107 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Gbp4Q61107 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gbp4Q61107 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.54■□□□□ 0.88
Gbp4Q61107 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gbp4Q61107 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gbp4Q61107 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gbp4Q61107 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gbp4Q61107 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.53■□□□□ 0.88
Gbp4Q61107 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.53■□□□□ 0.88
Gbp4Q61107 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Gbp4Q61107 Gm15546-201ENSMUST00000122095 826 ntBASIC20.53■□□□□ 0.88
Gbp4Q61107 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.53■□□□□ 0.88
Gbp4Q61107 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gbp4Q61107 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Gbp4Q61107 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms