Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sim1Q61045 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sim1Q61045 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sim1Q61045 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sim1Q61045 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.57■□□□□ 0.72
Sim1Q61045 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.57■□□□□ 0.72
Sim1Q61045 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.57■□□□□ 0.72
Sim1Q61045 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.57■□□□□ 0.72
Sim1Q61045 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
Sim1Q61045 AV356131-201ENSMUST00000206201 750 ntBASIC19.57■□□□□ 0.72
Sim1Q61045 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
Sim1Q61045 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sim1Q61045 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.56■□□□□ 0.72
Sim1Q61045 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sim1Q61045 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sim1Q61045 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sim1Q61045 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sim1Q61045 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.56■□□□□ 0.72
Sim1Q61045 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.56■□□□□ 0.72
Sim1Q61045 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.56■□□□□ 0.72
Sim1Q61045 Gm43530-201ENSMUST00000195920 274 ntBASIC19.56■□□□□ 0.72
Sim1Q61045 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sim1Q61045 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sim1Q61045 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sim1Q61045 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sim1Q61045 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sim1Q61045 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Sim1Q61045 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sim1Q61045 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sim1Q61045 Gm10602-201ENSMUST00000098239 609 ntBASIC19.55■□□□□ 0.72
Sim1Q61045 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sim1Q61045 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sim1Q61045 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.54■□□□□ 0.72
Sim1Q61045 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.54■□□□□ 0.72
Sim1Q61045 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.54■□□□□ 0.72
Sim1Q61045 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.54■□□□□ 0.72
Sim1Q61045 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sim1Q61045 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sim1Q61045 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim1Q61045 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim1Q61045 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sim1Q61045 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim1Q61045 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sim1Q61045 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim1Q61045 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.53■□□□□ 0.72
Sim1Q61045 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sim1Q61045 Gm42778-201ENSMUST00000199644 553 ntBASIC19.53■□□□□ 0.72
Sim1Q61045 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sim1Q61045 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Sim1Q61045 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sim1Q61045 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sim1Q61045 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Sim1Q61045 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Sim1Q61045 Gm10033-202ENSMUST00000211874 928 ntBASIC19.52■□□□□ 0.72
Sim1Q61045 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sim1Q61045 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sim1Q61045 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.52■□□□□ 0.72
Sim1Q61045 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sim1Q61045 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sim1Q61045 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sim1Q61045 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Sim1Q61045 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Sim1Q61045 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sim1Q61045 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sim1Q61045 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sim1Q61045 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.5■□□□□ 0.71
Sim1Q61045 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sim1Q61045 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.5■□□□□ 0.71
Sim1Q61045 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.5■□□□□ 0.71
Sim1Q61045 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sim1Q61045 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms