Protein–RNA interactions for Protein: Q60644

Nr1h2, Oxysterols receptor LXR-beta, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h2Q60644 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h2Q60644 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h2Q60644 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h2Q60644 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h2Q60644 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h2Q60644 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h2Q60644 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Nr1h2Q60644 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h2Q60644 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1h2Q60644 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h2Q60644 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1h2Q60644 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h2Q60644 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Nr1h2Q60644 Golgb1-201ENSMUST00000023534 498 ntBASIC19.19■□□□□ 0.66
Nr1h2Q60644 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nr1h2Q60644 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.19■□□□□ 0.66
Nr1h2Q60644 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1h2Q60644 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nr1h2Q60644 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1h2Q60644 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h2Q60644 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Nr1h2Q60644 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.16■□□□□ 0.66
Nr1h2Q60644 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.16■□□□□ 0.66
Nr1h2Q60644 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.16■□□□□ 0.66
Nr1h2Q60644 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h2Q60644 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h2Q60644 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nr1h2Q60644 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h2Q60644 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h2Q60644 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1h2Q60644 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h2Q60644 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h2Q60644 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.15■□□□□ 0.66
Nr1h2Q60644 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h2Q60644 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Nr1h2Q60644 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h2Q60644 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h2Q60644 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h2Q60644 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nr1h2Q60644 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1h2Q60644 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1h2Q60644 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1h2Q60644 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1h2Q60644 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nr1h2Q60644 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h2Q60644 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nr1h2Q60644 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.14■□□□□ 0.65
Nr1h2Q60644 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.14■□□□□ 0.65
Nr1h2Q60644 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.14■□□□□ 0.65
Nr1h2Q60644 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h2Q60644 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nr1h2Q60644 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.14■□□□□ 0.65
Nr1h2Q60644 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.14■□□□□ 0.65
Nr1h2Q60644 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h2Q60644 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h2Q60644 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h2Q60644 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h2Q60644 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nr1h2Q60644 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Nr1h2Q60644 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Nr1h2Q60644 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nr1h2Q60644 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms