Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm13534-201ENSMUST00000121169 513 ntBASIC24.51■■□□□ 1.51
Ubr3Q5U430 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC24.51■■□□□ 1.51
Ubr3Q5U430 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr3Q5U430 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr3Q5U430 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr3Q5U430 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC24.51■■□□□ 1.51
Ubr3Q5U430 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr3Q5U430 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC24.51■■□□□ 1.51
Ubr3Q5U430 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ubr3Q5U430 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC24.5■■□□□ 1.51
Ubr3Q5U430 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Ubr3Q5U430 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Ubr3Q5U430 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC24.49■■□□□ 1.51
Ubr3Q5U430 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr3Q5U430 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr3Q5U430 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr3Q5U430 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.49■■□□□ 1.51
Ubr3Q5U430 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr3Q5U430 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC24.49■■□□□ 1.51
Ubr3Q5U430 Trmt13-210ENSMUST00000198454 880 ntBASIC24.49■■□□□ 1.51
Ubr3Q5U430 Gm10812-201ENSMUST00000099864 546 ntBASIC24.49■■□□□ 1.51
Ubr3Q5U430 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.49■■□□□ 1.51
Ubr3Q5U430 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Ubr3Q5U430 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC24.48■■□□□ 1.51
Ubr3Q5U430 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ubr3Q5U430 Gm29241-201ENSMUST00000189260 1096 ntBASIC24.48■■□□□ 1.51
Ubr3Q5U430 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ubr3Q5U430 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Ubr3Q5U430 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ubr3Q5U430 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ubr3Q5U430 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ubr3Q5U430 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Ubr3Q5U430 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ubr3Q5U430 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Ubr3Q5U430 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.47■■□□□ 1.51
Ubr3Q5U430 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.47■■□□□ 1.51
Ubr3Q5U430 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr3Q5U430 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr3Q5U430 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr3Q5U430 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC24.46■■□□□ 1.51
Ubr3Q5U430 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC24.46■■□□□ 1.51
Ubr3Q5U430 Gm44878-201ENSMUST00000205812 1295 ntBASIC24.46■■□□□ 1.51
Ubr3Q5U430 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC24.46■■□□□ 1.51
Ubr3Q5U430 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr3Q5U430 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC24.46■■□□□ 1.51
Ubr3Q5U430 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Ubr3Q5U430 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr3Q5U430 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr3Q5U430 Gm22325-201ENSMUST00000158904 308 ntBASIC24.45■■□□□ 1.51
Ubr3Q5U430 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ubr3Q5U430 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ubr3Q5U430 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ubr3Q5U430 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr3Q5U430 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr3Q5U430 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.45■■□□□ 1.5
Ubr3Q5U430 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr3Q5U430 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr3Q5U430 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr3Q5U430 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr3Q5U430 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC24.45■■□□□ 1.5
Ubr3Q5U430 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC24.45■■□□□ 1.5
Ubr3Q5U430 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr3Q5U430 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr3Q5U430 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr3Q5U430 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr3Q5U430 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr3Q5U430 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr3Q5U430 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr3Q5U430 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr3Q5U430 Gm13181-201ENSMUST00000120117 1069 ntBASIC24.43■■□□□ 1.5
Ubr3Q5U430 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr3Q5U430 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr3Q5U430 Gm42911-201ENSMUST00000199360 1630 ntBASIC24.41■■□□□ 1.5
Ubr3Q5U430 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr3Q5U430 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr3Q5U430 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.41■■□□□ 1.5
Ubr3Q5U430 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr3Q5U430 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Ubr3Q5U430 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr3Q5U430 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr3Q5U430 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr3Q5U430 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Ubr3Q5U430 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ubr3Q5U430 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC24.4■■□□□ 1.5
Ubr3Q5U430 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC24.4■■□□□ 1.5
Ubr3Q5U430 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ubr3Q5U430 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Ubr3Q5U430 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Ubr3Q5U430 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Ubr3Q5U430 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms