Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Scn2bQ56A07 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn2bQ56A07 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn2bQ56A07 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn2bQ56A07 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn2bQ56A07 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn2bQ56A07 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn2bQ56A07 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.5■□□□□ 0.71
Scn2bQ56A07 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn2bQ56A07 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
Scn2bQ56A07 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.5■□□□□ 0.71
Scn2bQ56A07 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn2bQ56A07 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn2bQ56A07 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn2bQ56A07 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn2bQ56A07 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.49■□□□□ 0.71
Scn2bQ56A07 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn2bQ56A07 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn2bQ56A07 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn2bQ56A07 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn2bQ56A07 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn2bQ56A07 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Scn2bQ56A07 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn2bQ56A07 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn2bQ56A07 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn2bQ56A07 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn2bQ56A07 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Scn2bQ56A07 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.46■□□□□ 0.71
Scn2bQ56A07 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.46■□□□□ 0.71
Scn2bQ56A07 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn2bQ56A07 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn2bQ56A07 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.45■□□□□ 0.7
Scn2bQ56A07 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.45■□□□□ 0.7
Scn2bQ56A07 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scn2bQ56A07 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.45■□□□□ 0.7
Scn2bQ56A07 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Scn2bQ56A07 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn2bQ56A07 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn2bQ56A07 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scn2bQ56A07 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn2bQ56A07 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Scn2bQ56A07 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scn2bQ56A07 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn2bQ56A07 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn2bQ56A07 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn2bQ56A07 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Scn2bQ56A07 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.42■□□□□ 0.7
Scn2bQ56A07 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn2bQ56A07 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn2bQ56A07 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
Scn2bQ56A07 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.42■□□□□ 0.7
Scn2bQ56A07 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Scn2bQ56A07 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Scn2bQ56A07 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Scn2bQ56A07 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn2bQ56A07 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scn2bQ56A07 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms