Protein–RNA interactions for Protein: Q3UTC0

B020004J07Rik, RIKEN cDNA B020004J07 gene, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004J07RikQ3UTC0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
B020004J07RikQ3UTC0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
B020004J07RikQ3UTC0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
B020004J07RikQ3UTC0 Gm27801-201ENSMUST00000184174 223 ntBASIC20.52■□□□□ 0.88
B020004J07RikQ3UTC0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
B020004J07RikQ3UTC0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
B020004J07RikQ3UTC0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
B020004J07RikQ3UTC0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
B020004J07RikQ3UTC0 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.51■□□□□ 0.87
B020004J07RikQ3UTC0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
B020004J07RikQ3UTC0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.51■□□□□ 0.87
B020004J07RikQ3UTC0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
B020004J07RikQ3UTC0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.51■□□□□ 0.87
B020004J07RikQ3UTC0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
B020004J07RikQ3UTC0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
B020004J07RikQ3UTC0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
B020004J07RikQ3UTC0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.51■□□□□ 0.87
B020004J07RikQ3UTC0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
B020004J07RikQ3UTC0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
B020004J07RikQ3UTC0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.49■□□□□ 0.87
B020004J07RikQ3UTC0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
B020004J07RikQ3UTC0 Gm13234-201ENSMUST00000120010 747 ntBASIC20.49■□□□□ 0.87
B020004J07RikQ3UTC0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
B020004J07RikQ3UTC0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
B020004J07RikQ3UTC0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
B020004J07RikQ3UTC0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
B020004J07RikQ3UTC0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
B020004J07RikQ3UTC0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.47■□□□□ 0.87
B020004J07RikQ3UTC0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
B020004J07RikQ3UTC0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
B020004J07RikQ3UTC0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
B020004J07RikQ3UTC0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
B020004J07RikQ3UTC0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
B020004J07RikQ3UTC0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
B020004J07RikQ3UTC0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
B020004J07RikQ3UTC0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
B020004J07RikQ3UTC0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
B020004J07RikQ3UTC0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
B020004J07RikQ3UTC0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
B020004J07RikQ3UTC0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
B020004J07RikQ3UTC0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.44■□□□□ 0.86
B020004J07RikQ3UTC0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
B020004J07RikQ3UTC0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
B020004J07RikQ3UTC0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.43■□□□□ 0.86
B020004J07RikQ3UTC0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
B020004J07RikQ3UTC0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms