Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Brd9Q3UQU0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Brd9Q3UQU0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.18■■□□□ 1.14
Brd9Q3UQU0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Brd9Q3UQU0 Gm10849-201ENSMUST00000100397 618 ntBASIC22.18■■□□□ 1.14
Brd9Q3UQU0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
Brd9Q3UQU0 Gm27801-201ENSMUST00000184174 223 ntBASIC22.18■■□□□ 1.14
Brd9Q3UQU0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Brd9Q3UQU0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Brd9Q3UQU0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.18■■□□□ 1.14
Brd9Q3UQU0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.17■■□□□ 1.14
Brd9Q3UQU0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Brd9Q3UQU0 Gm10033-202ENSMUST00000211874 928 ntBASIC22.16■■□□□ 1.14
Brd9Q3UQU0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Brd9Q3UQU0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Brd9Q3UQU0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Brd9Q3UQU0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Brd9Q3UQU0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Brd9Q3UQU0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Brd9Q3UQU0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Brd9Q3UQU0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Brd9Q3UQU0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Brd9Q3UQU0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Brd9Q3UQU0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Brd9Q3UQU0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Brd9Q3UQU0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Brd9Q3UQU0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Brd9Q3UQU0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Brd9Q3UQU0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Brd9Q3UQU0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.14■■□□□ 1.13
Brd9Q3UQU0 Gm42569-201ENSMUST00000200539 472 ntBASIC22.14■■□□□ 1.13
Brd9Q3UQU0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.14■■□□□ 1.13
Brd9Q3UQU0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
Brd9Q3UQU0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Brd9Q3UQU0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Brd9Q3UQU0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Brd9Q3UQU0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Brd9Q3UQU0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Brd9Q3UQU0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Brd9Q3UQU0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Brd9Q3UQU0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Brd9Q3UQU0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Brd9Q3UQU0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Brd9Q3UQU0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.12■■□□□ 1.13
Brd9Q3UQU0 Gm7291-201ENSMUST00000199147 382 ntBASIC22.12■■□□□ 1.13
Brd9Q3UQU0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.12■■□□□ 1.13
Brd9Q3UQU0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Brd9Q3UQU0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
Brd9Q3UQU0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Brd9Q3UQU0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Brd9Q3UQU0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Brd9Q3UQU0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Brd9Q3UQU0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.11■■□□□ 1.13
Brd9Q3UQU0 Gm9988-201ENSMUST00000069786 435 ntBASIC22.11■■□□□ 1.13
Brd9Q3UQU0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Brd9Q3UQU0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Brd9Q3UQU0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Brd9Q3UQU0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.1■■□□□ 1.13
Brd9Q3UQU0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.1■■□□□ 1.13
Brd9Q3UQU0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Brd9Q3UQU0 Gm27405-201ENSMUST00000184201 112 ntBASIC22.1■■□□□ 1.13
Brd9Q3UQU0 Gm18671-201ENSMUST00000214826 683 ntBASIC22.1■■□□□ 1.13
Brd9Q3UQU0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.1■■□□□ 1.13
Brd9Q3UQU0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Brd9Q3UQU0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Brd9Q3UQU0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Gm42778-201ENSMUST00000199644 553 ntBASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 AA386476-201ENSMUST00000098781 1665 ntBASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brd9Q3UQU0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Brd9Q3UQU0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Brd9Q3UQU0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Brd9Q3UQU0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms