Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc6aQ3UHK8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.46■□□□□ 0.54
Tnrc6aQ3UHK8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tnrc6aQ3UHK8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tnrc6aQ3UHK8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tnrc6aQ3UHK8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnrc6aQ3UHK8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnrc6aQ3UHK8 Gm9988-201ENSMUST00000069786 435 ntBASIC18.45■□□□□ 0.54
Tnrc6aQ3UHK8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnrc6aQ3UHK8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc6aQ3UHK8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc6aQ3UHK8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc6aQ3UHK8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc6aQ3UHK8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc6aQ3UHK8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc6aQ3UHK8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc6aQ3UHK8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.42■□□□□ 0.54
Tnrc6aQ3UHK8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc6aQ3UHK8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc6aQ3UHK8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc6aQ3UHK8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc6aQ3UHK8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.42■□□□□ 0.54
Tnrc6aQ3UHK8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnrc6aQ3UHK8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnrc6aQ3UHK8 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.41■□□□□ 0.54
Tnrc6aQ3UHK8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnrc6aQ3UHK8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnrc6aQ3UHK8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tnrc6aQ3UHK8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnrc6aQ3UHK8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Tnrc6aQ3UHK8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.39■□□□□ 0.54
Tnrc6aQ3UHK8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tnrc6aQ3UHK8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tnrc6aQ3UHK8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnrc6aQ3UHK8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.39■□□□□ 0.53
Tnrc6aQ3UHK8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnrc6aQ3UHK8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnrc6aQ3UHK8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnrc6aQ3UHK8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Tnrc6aQ3UHK8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms