Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf149Q3U2C5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf149Q3U2C5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rnf149Q3U2C5 Gm14117-201ENSMUST00000122417 843 ntBASIC17.62■□□□□ 0.41
Rnf149Q3U2C5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf149Q3U2C5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf149Q3U2C5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Gm7417-201ENSMUST00000192950 473 ntBASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Gm45102-201ENSMUST00000207427 857 ntBASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf149Q3U2C5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Gm40881-201ENSMUST00000223397 166 ntBASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf149Q3U2C5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf149Q3U2C5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf149Q3U2C5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf149Q3U2C5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf149Q3U2C5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
Rnf149Q3U2C5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf149Q3U2C5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf149Q3U2C5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf149Q3U2C5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf149Q3U2C5 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.55■□□□□ 0.4
Rnf149Q3U2C5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf149Q3U2C5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf149Q3U2C5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf149Q3U2C5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf149Q3U2C5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf149Q3U2C5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf149Q3U2C5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf149Q3U2C5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms