Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc28Q3TX51 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc28Q3TX51 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Lrrc28Q3TX51 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc28Q3TX51 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc28Q3TX51 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc28Q3TX51 Gm42642-201ENSMUST00000200683 355 ntBASIC18.69■□□□□ 0.58
Lrrc28Q3TX51 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Lrrc28Q3TX51 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc28Q3TX51 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc28Q3TX51 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lrrc28Q3TX51 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc28Q3TX51 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc28Q3TX51 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc28Q3TX51 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc28Q3TX51 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Lrrc28Q3TX51 Gm26571-201ENSMUST00000181399 666 ntBASIC18.67■□□□□ 0.58
Lrrc28Q3TX51 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc28Q3TX51 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lrrc28Q3TX51 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc28Q3TX51 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc28Q3TX51 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrc28Q3TX51 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrc28Q3TX51 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Lrrc28Q3TX51 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.64■□□□□ 0.57
Lrrc28Q3TX51 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrc28Q3TX51 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrc28Q3TX51 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrc28Q3TX51 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Lrrc28Q3TX51 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrc28Q3TX51 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms