Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd8Q09XV5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Chd8Q09XV5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Chd8Q09XV5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd8Q09XV5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd8Q09XV5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.01■□□□□ 0.47
Chd8Q09XV5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd8Q09XV5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd8Q09XV5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd8Q09XV5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd8Q09XV5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd8Q09XV5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd8Q09XV5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd8Q09XV5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd8Q09XV5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18■□□□□ 0.47
Chd8Q09XV5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd8Q09XV5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18■□□□□ 0.47
Chd8Q09XV5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd8Q09XV5 Rab3c-203ENSMUST00000224180 967 ntBASIC18■□□□□ 0.47
Chd8Q09XV5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Chd8Q09XV5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18■□□□□ 0.47
Chd8Q09XV5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
Chd8Q09XV5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd8Q09XV5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chd8Q09XV5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd8Q09XV5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Chd8Q09XV5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Chd8Q09XV5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd8Q09XV5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd8Q09XV5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Chd8Q09XV5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd8Q09XV5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd8Q09XV5 Gm13534-201ENSMUST00000121169 513 ntBASIC17.98■□□□□ 0.47
Chd8Q09XV5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd8Q09XV5 Gm2559-201ENSMUST00000201323 363 ntBASIC17.98■□□□□ 0.47
Chd8Q09XV5 Gm9103-201ENSMUST00000119371 405 ntBASIC17.98■□□□□ 0.47
Chd8Q09XV5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd8Q09XV5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.98■□□□□ 0.47
Chd8Q09XV5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd8Q09XV5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chd8Q09XV5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd8Q09XV5 Gm10698-201ENSMUST00000182663 604 ntBASIC17.96■□□□□ 0.47
Chd8Q09XV5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd8Q09XV5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd8Q09XV5 Gm5417-201ENSMUST00000079706 384 ntBASIC17.96■□□□□ 0.47
Chd8Q09XV5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd8Q09XV5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd8Q09XV5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd8Q09XV5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chd8Q09XV5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.95■□□□□ 0.46
Chd8Q09XV5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Chd8Q09XV5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd8Q09XV5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chd8Q09XV5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Chd8Q09XV5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd8Q09XV5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.93■□□□□ 0.46
Chd8Q09XV5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd8Q09XV5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chd8Q09XV5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.92■□□□□ 0.46
Chd8Q09XV5 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.92■□□□□ 0.46
Chd8Q09XV5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.92■□□□□ 0.46
Chd8Q09XV5 Gm33142-201ENSMUST00000193913 867 ntBASIC17.92■□□□□ 0.46
Chd8Q09XV5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chd8Q09XV5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd8Q09XV5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd8Q09XV5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd8Q09XV5 Gm23634-201ENSMUST00000175071 91 ntBASIC17.91■□□□□ 0.46
Chd8Q09XV5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.91■□□□□ 0.46
Chd8Q09XV5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms