Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.81□□□□□ -0.04
Hspg2Q05793 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 Gm8520-201ENSMUST00000186517 868 ntBASIC14.81□□□□□ -0.04
Hspg2Q05793 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.81□□□□□ -0.04
Hspg2Q05793 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hspg2Q05793 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hspg2Q05793 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hspg2Q05793 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hspg2Q05793 Gm13836-201ENSMUST00000121159 501 ntBASIC14.8□□□□□ -0.04
Hspg2Q05793 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hspg2Q05793 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hspg2Q05793 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.8□□□□□ -0.04
Hspg2Q05793 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Hspg2Q05793 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Hspg2Q05793 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hspg2Q05793 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hspg2Q05793 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.79□□□□□ -0.04
Hspg2Q05793 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Hspg2Q05793 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.79□□□□□ -0.04
Hspg2Q05793 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hspg2Q05793 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.79□□□□□ -0.04
Hspg2Q05793 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hspg2Q05793 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.78□□□□□ -0.04
Hspg2Q05793 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hspg2Q05793 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hspg2Q05793 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hspg2Q05793 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Hspg2Q05793 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.77□□□□□ -0.04
Hspg2Q05793 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hspg2Q05793 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hspg2Q05793 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.77□□□□□ -0.04
Hspg2Q05793 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Hspg2Q05793 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.77□□□□□ -0.04
Hspg2Q05793 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hspg2Q05793 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Hspg2Q05793 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hspg2Q05793 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hspg2Q05793 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hspg2Q05793 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.76□□□□□ -0.05
Hspg2Q05793 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.76□□□□□ -0.05
Hspg2Q05793 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.76□□□□□ -0.05
Hspg2Q05793 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hspg2Q05793 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hspg2Q05793 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.76□□□□□ -0.05
Hspg2Q05793 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hspg2Q05793 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hspg2Q05793 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hspg2Q05793 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hspg2Q05793 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hspg2Q05793 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hspg2Q05793 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Hspg2Q05793 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hspg2Q05793 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.75□□□□□ -0.05
Hspg2Q05793 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.75□□□□□ -0.05
Hspg2Q05793 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hspg2Q05793 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hspg2Q05793 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hspg2Q05793 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hspg2Q05793 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Hspg2Q05793 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Hspg2Q05793 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hspg2Q05793 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hspg2Q05793 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hspg2Q05793 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Hspg2Q05793 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.74□□□□□ -0.05
Hspg2Q05793 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.74□□□□□ -0.05
Hspg2Q05793 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hspg2Q05793 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hspg2Q05793 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hspg2Q05793 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hspg2Q05793 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Hspg2Q05793 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms