Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gbx1P82976 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gbx1P82976 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gbx1P82976 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gbx1P82976 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gbx1P82976 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gbx1P82976 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.53■□□□□ 0.56
Gbx1P82976 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.53■□□□□ 0.56
Gbx1P82976 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.53■□□□□ 0.56
Gbx1P82976 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gbx1P82976 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gbx1P82976 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.52■□□□□ 0.56
Gbx1P82976 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gbx1P82976 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gbx1P82976 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.52■□□□□ 0.56
Gbx1P82976 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.52■□□□□ 0.56
Gbx1P82976 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gbx1P82976 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gbx1P82976 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gbx1P82976 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Gbx1P82976 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gbx1P82976 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.52■□□□□ 0.55
Gbx1P82976 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.51■□□□□ 0.55
Gbx1P82976 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gbx1P82976 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gbx1P82976 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gbx1P82976 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gbx1P82976 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.51■□□□□ 0.55
Gbx1P82976 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gbx1P82976 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.51■□□□□ 0.55
Gbx1P82976 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
Gbx1P82976 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gbx1P82976 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gbx1P82976 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gbx1P82976 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.51■□□□□ 0.55
Gbx1P82976 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gbx1P82976 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gbx1P82976 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gbx1P82976 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gbx1P82976 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gbx1P82976 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.5■□□□□ 0.55
Gbx1P82976 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gbx1P82976 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gbx1P82976 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gbx1P82976 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gbx1P82976 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gbx1P82976 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gbx1P82976 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gbx1P82976 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gbx1P82976 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.49■□□□□ 0.55
Gbx1P82976 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gbx1P82976 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gbx1P82976 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gbx1P82976 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gbx1P82976 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.48■□□□□ 0.55
Gbx1P82976 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gbx1P82976 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gbx1P82976 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gbx1P82976 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gbx1P82976 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gbx1P82976 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gbx1P82976 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Gbx1P82976 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Gbx1P82976 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gbx1P82976 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gbx1P82976 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.47■□□□□ 0.55
Gbx1P82976 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gbx1P82976 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gbx1P82976 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gbx1P82976 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gbx1P82976 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gbx1P82976 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gbx1P82976 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.46■□□□□ 0.55
Gbx1P82976 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gbx1P82976 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gbx1P82976 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.46■□□□□ 0.55
Gbx1P82976 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gbx1P82976 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.46■□□□□ 0.55
Gbx1P82976 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Gbx1P82976 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gbx1P82976 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gbx1P82976 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gbx1P82976 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Gbx1P82976 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gbx1P82976 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Gbx1P82976 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.45■□□□□ 0.54
Gbx1P82976 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Gbx1P82976 Gm45102-201ENSMUST00000207427 857 ntBASIC18.45■□□□□ 0.54
Gbx1P82976 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gbx1P82976 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gbx1P82976 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gbx1P82976 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gbx1P82976 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.44■□□□□ 0.54
Gbx1P82976 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gbx1P82976 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gbx1P82976 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gbx1P82976 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gbx1P82976 Gm14117-201ENSMUST00000122417 843 ntBASIC18.44■□□□□ 0.54
Gbx1P82976 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Gbx1P82976 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms