Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SgcdP82347 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SgcdP82347 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SgcdP82347 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SgcdP82347 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SgcdP82347 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SgcdP82347 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SgcdP82347 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.14■□□□□ 0.49
SgcdP82347 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.14■□□□□ 0.49
SgcdP82347 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SgcdP82347 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.14■□□□□ 0.49
SgcdP82347 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SgcdP82347 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SgcdP82347 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SgcdP82347 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcdP82347 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SgcdP82347 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
SgcdP82347 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SgcdP82347 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SgcdP82347 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcdP82347 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SgcdP82347 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.13■□□□□ 0.49
SgcdP82347 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SgcdP82347 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.13■□□□□ 0.49
SgcdP82347 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SgcdP82347 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SgcdP82347 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SgcdP82347 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SgcdP82347 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcdP82347 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.12■□□□□ 0.49
SgcdP82347 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcdP82347 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.12■□□□□ 0.49
SgcdP82347 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SgcdP82347 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcdP82347 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.12■□□□□ 0.49
SgcdP82347 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.12■□□□□ 0.49
SgcdP82347 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcdP82347 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SgcdP82347 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
SgcdP82347 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SgcdP82347 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SgcdP82347 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.11■□□□□ 0.49
SgcdP82347 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.11■□□□□ 0.49
SgcdP82347 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SgcdP82347 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SgcdP82347 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SgcdP82347 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcdP82347 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcdP82347 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.1■□□□□ 0.49
SgcdP82347 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.1■□□□□ 0.49
SgcdP82347 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcdP82347 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SgcdP82347 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SgcdP82347 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SgcdP82347 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcdP82347 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcdP82347 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcdP82347 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.1■□□□□ 0.49
SgcdP82347 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcdP82347 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SgcdP82347 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.09■□□□□ 0.49
SgcdP82347 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.09■□□□□ 0.49
SgcdP82347 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.09■□□□□ 0.49
SgcdP82347 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.09■□□□□ 0.49
SgcdP82347 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcdP82347 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SgcdP82347 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SgcdP82347 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SgcdP82347 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SgcdP82347 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SgcdP82347 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SgcdP82347 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SgcdP82347 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcdP82347 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SgcdP82347 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcdP82347 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcdP82347 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcdP82347 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SgcdP82347 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcdP82347 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SgcdP82347 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcdP82347 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.07■□□□□ 0.48
SgcdP82347 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.06■□□□□ 0.48
SgcdP82347 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SgcdP82347 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SgcdP82347 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcdP82347 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcdP82347 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SgcdP82347 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcdP82347 Rarb-207ENSMUST00000225921 2756 ntBASIC18.06■□□□□ 0.48
SgcdP82347 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms