Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pdlim4P70271 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim4P70271 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim4P70271 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.33■□□□□ 0.21
Pdlim4P70271 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim4P70271 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim4P70271 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim4P70271 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pdlim4P70271 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim4P70271 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Pdlim4P70271 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.33■□□□□ 0.2
Pdlim4P70271 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pdlim4P70271 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim4P70271 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim4P70271 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.33■□□□□ 0.2
Pdlim4P70271 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pdlim4P70271 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim4P70271 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim4P70271 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim4P70271 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pdlim4P70271 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pdlim4P70271 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim4P70271 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim4P70271 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim4P70271 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim4P70271 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.32■□□□□ 0.2
Pdlim4P70271 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.32■□□□□ 0.2
Pdlim4P70271 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Pdlim4P70271 Gm43137-201ENSMUST00000198052 594 ntBASIC16.32■□□□□ 0.2
Pdlim4P70271 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim4P70271 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.32■□□□□ 0.2
Pdlim4P70271 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim4P70271 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.32■□□□□ 0.2
Pdlim4P70271 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pdlim4P70271 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim4P70271 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pdlim4P70271 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Pdlim4P70271 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pdlim4P70271 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Pdlim4P70271 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.3■□□□□ 0.2
Pdlim4P70271 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim4P70271 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.3■□□□□ 0.2
Pdlim4P70271 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.29■□□□□ 0.2
Pdlim4P70271 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim4P70271 Gm27454-201ENSMUST00000185090 204 ntBASIC16.29■□□□□ 0.2
Pdlim4P70271 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim4P70271 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.29■□□□□ 0.2
Pdlim4P70271 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim4P70271 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim4P70271 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim4P70271 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Pdlim4P70271 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pdlim4P70271 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.28■□□□□ 0.2
Pdlim4P70271 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.28■□□□□ 0.2
Pdlim4P70271 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.28■□□□□ 0.2
Pdlim4P70271 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pdlim4P70271 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.28■□□□□ 0.2
Pdlim4P70271 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim4P70271 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.28■□□□□ 0.2
Pdlim4P70271 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim4P70271 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim4P70271 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim4P70271 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim4P70271 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pdlim4P70271 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.27■□□□□ 0.2
Pdlim4P70271 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim4P70271 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdlim4P70271 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdlim4P70271 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.27■□□□□ 0.19
Pdlim4P70271 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pdlim4P70271 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim4P70271 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms