Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Gm43137-201ENSMUST00000198052 594 ntBASIC18.44■□□□□ 0.54
Six5P70178 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.44■□□□□ 0.54
Six5P70178 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.44■□□□□ 0.54
Six5P70178 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six5P70178 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.43■□□□□ 0.54
Six5P70178 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six5P70178 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six5P70178 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.43■□□□□ 0.54
Six5P70178 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six5P70178 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Six5P70178 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.43■□□□□ 0.54
Six5P70178 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Six5P70178 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.43■□□□□ 0.54
Six5P70178 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six5P70178 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Six5P70178 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Six5P70178 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six5P70178 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six5P70178 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Six5P70178 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Six5P70178 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six5P70178 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six5P70178 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six5P70178 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Six5P70178 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Six5P70178 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six5P70178 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Six5P70178 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six5P70178 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six5P70178 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Six5P70178 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six5P70178 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six5P70178 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six5P70178 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six5P70178 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six5P70178 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six5P70178 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Six5P70178 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six5P70178 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.4■□□□□ 0.54
Six5P70178 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six5P70178 Spcs1-204ENSMUST00000226782 949 ntBASIC18.4■□□□□ 0.54
Six5P70178 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six5P70178 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six5P70178 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Six5P70178 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six5P70178 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Six5P70178 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six5P70178 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six5P70178 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Six5P70178 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six5P70178 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.39■□□□□ 0.53
Six5P70178 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six5P70178 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Six5P70178 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Six5P70178 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six5P70178 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six5P70178 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six5P70178 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six5P70178 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six5P70178 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six5P70178 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six5P70178 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six5P70178 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.38■□□□□ 0.53
Six5P70178 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Six5P70178 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Six5P70178 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six5P70178 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.38■□□□□ 0.53
Six5P70178 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Six5P70178 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.38■□□□□ 0.53
Six5P70178 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Six5P70178 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six5P70178 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.37■□□□□ 0.53
Six5P70178 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Six5P70178 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six5P70178 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Six5P70178 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six5P70178 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Six5P70178 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six5P70178 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Six5P70178 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Six5P70178 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Six5P70178 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Six5P70178 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six5P70178 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six5P70178 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.36■□□□□ 0.53
Six5P70178 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Six5P70178 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms