Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ybx1P62960 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.32■□□□□ 0.84
Ybx1P62960 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ybx1P62960 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ybx1P62960 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ybx1P62960 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.31■□□□□ 0.84
Ybx1P62960 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ybx1P62960 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ybx1P62960 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ybx1P62960 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ybx1P62960 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ybx1P62960 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ybx1P62960 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ybx1P62960 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ybx1P62960 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ybx1P62960 Gm13234-201ENSMUST00000120010 747 ntBASIC20.3■□□□□ 0.84
Ybx1P62960 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ybx1P62960 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ybx1P62960 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.3■□□□□ 0.84
Ybx1P62960 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.29■□□□□ 0.84
Ybx1P62960 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx1P62960 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.29■□□□□ 0.84
Ybx1P62960 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.28■□□□□ 0.84
Ybx1P62960 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ybx1P62960 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 Gm10602-201ENSMUST00000098239 609 ntBASIC20.28■□□□□ 0.84
Ybx1P62960 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx1P62960 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx1P62960 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx1P62960 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ybx1P62960 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx1P62960 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.27■□□□□ 0.84
Ybx1P62960 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.27■□□□□ 0.84
Ybx1P62960 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.27■□□□□ 0.84
Ybx1P62960 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ybx1P62960 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ybx1P62960 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ybx1P62960 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx1P62960 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx1P62960 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ybx1P62960 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx1P62960 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx1P62960 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.25■□□□□ 0.83
Ybx1P62960 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.25■□□□□ 0.83
Ybx1P62960 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Ybx1P62960 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx1P62960 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ybx1P62960 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ybx1P62960 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ybx1P62960 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.24■□□□□ 0.83
Ybx1P62960 Gm27801-201ENSMUST00000184174 223 ntBASIC20.24■□□□□ 0.83
Ybx1P62960 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.24■□□□□ 0.83
Ybx1P62960 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.24■□□□□ 0.83
Ybx1P62960 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ybx1P62960 Notumos-201ENSMUST00000151998 2659 ntBASIC20.24■□□□□ 0.83
Ybx1P62960 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ybx1P62960 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.24■□□□□ 0.83
Ybx1P62960 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ybx1P62960 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ybx1P62960 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ybx1P62960 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.23■□□□□ 0.83
Ybx1P62960 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ybx1P62960 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ybx1P62960 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ybx1P62960 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ybx1P62960 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ybx1P62960 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ybx1P62960 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.22■□□□□ 0.83
Ybx1P62960 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.22■□□□□ 0.83
Ybx1P62960 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms