Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sec61a1P61620 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.25■□□□□ 0.35
Sec61a1P61620 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.25■□□□□ 0.35
Sec61a1P61620 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.25■□□□□ 0.35
Sec61a1P61620 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sec61a1P61620 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.24■□□□□ 0.35
Sec61a1P61620 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sec61a1P61620 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sec61a1P61620 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a1P61620 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a1P61620 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a1P61620 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a1P61620 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a1P61620 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a1P61620 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a1P61620 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sec61a1P61620 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a1P61620 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a1P61620 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a1P61620 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a1P61620 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a1P61620 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a1P61620 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a1P61620 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.22■□□□□ 0.35
Sec61a1P61620 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a1P61620 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Sec61a1P61620 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sec61a1P61620 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a1P61620 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a1P61620 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.22■□□□□ 0.35
Sec61a1P61620 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.22■□□□□ 0.35
Sec61a1P61620 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.22■□□□□ 0.35
Sec61a1P61620 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sec61a1P61620 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a1P61620 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a1P61620 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a1P61620 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a1P61620 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a1P61620 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.22■□□□□ 0.35
Sec61a1P61620 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sec61a1P61620 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.21■□□□□ 0.35
Sec61a1P61620 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a1P61620 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a1P61620 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sec61a1P61620 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a1P61620 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a1P61620 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a1P61620 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sec61a1P61620 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sec61a1P61620 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sec61a1P61620 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a1P61620 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sec61a1P61620 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.19■□□□□ 0.34
Sec61a1P61620 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sec61a1P61620 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sec61a1P61620 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.19■□□□□ 0.34
Sec61a1P61620 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sec61a1P61620 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sec61a1P61620 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sec61a1P61620 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sec61a1P61620 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.18■□□□□ 0.34
Sec61a1P61620 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a1P61620 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sec61a1P61620 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms