Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NcanP55066 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NcanP55066 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NcanP55066 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NcanP55066 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NcanP55066 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.18■□□□□ 0.98
NcanP55066 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.17■□□□□ 0.98
NcanP55066 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.17■□□□□ 0.98
NcanP55066 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.17■□□□□ 0.98
NcanP55066 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NcanP55066 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NcanP55066 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NcanP55066 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NcanP55066 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.16■□□□□ 0.98
NcanP55066 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NcanP55066 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NcanP55066 Gm11643-201ENSMUST00000119578 864 ntBASIC21.16■□□□□ 0.98
NcanP55066 Gm38205-201ENSMUST00000192243 258 ntBASIC21.16■□□□□ 0.98
NcanP55066 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.16■□□□□ 0.98
NcanP55066 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NcanP55066 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NcanP55066 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NcanP55066 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NcanP55066 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NcanP55066 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NcanP55066 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NcanP55066 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.15■□□□□ 0.98
NcanP55066 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NcanP55066 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
NcanP55066 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NcanP55066 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.14■□□□□ 0.97
NcanP55066 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.14■□□□□ 0.97
NcanP55066 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.14■□□□□ 0.97
NcanP55066 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.14■□□□□ 0.97
NcanP55066 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NcanP55066 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NcanP55066 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NcanP55066 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NcanP55066 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NcanP55066 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NcanP55066 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.13■□□□□ 0.97
NcanP55066 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.13■□□□□ 0.97
NcanP55066 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NcanP55066 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.12■□□□□ 0.97
NcanP55066 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NcanP55066 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NcanP55066 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NcanP55066 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
NcanP55066 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.11■□□□□ 0.97
NcanP55066 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NcanP55066 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NcanP55066 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NcanP55066 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NcanP55066 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NcanP55066 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NcanP55066 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NcanP55066 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NcanP55066 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NcanP55066 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.1■□□□□ 0.97
NcanP55066 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NcanP55066 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NcanP55066 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NcanP55066 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NcanP55066 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NcanP55066 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NcanP55066 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NcanP55066 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NcanP55066 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NcanP55066 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NcanP55066 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.09■□□□□ 0.97
NcanP55066 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NcanP55066 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NcanP55066 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NcanP55066 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.08■□□□□ 0.97
NcanP55066 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NcanP55066 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NcanP55066 Gm27275-201ENSMUST00000184318 272 ntBASIC21.08■□□□□ 0.97
NcanP55066 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
NcanP55066 Gm10819-201ENSMUST00000099988 561 ntBASIC21.08■□□□□ 0.97
NcanP55066 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NcanP55066 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NcanP55066 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
NcanP55066 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NcanP55066 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NcanP55066 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NcanP55066 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.07■□□□□ 0.96
NcanP55066 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NcanP55066 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NcanP55066 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NcanP55066 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NcanP55066 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms