Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.12■■□□□ 1.13
Hmgcs2P54869 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs2P54869 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs2P54869 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Hmgcs2P54869 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.11■■□□□ 1.13
Hmgcs2P54869 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Hmgcs2P54869 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Hmgcs2P54869 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.11■■□□□ 1.13
Hmgcs2P54869 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hmgcs2P54869 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Hmgcs2P54869 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Hmgcs2P54869 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmgcs2P54869 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hmgcs2P54869 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Hmgcs2P54869 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hmgcs2P54869 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hmgcs2P54869 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.09■■□□□ 1.13
Hmgcs2P54869 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Hmgcs2P54869 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hmgcs2P54869 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Hmgcs2P54869 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Hmgcs2P54869 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Hmgcs2P54869 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Hmgcs2P54869 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Hmgcs2P54869 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
Hmgcs2P54869 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Hmgcs2P54869 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.08■■□□□ 1.13
Hmgcs2P54869 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.08■■□□□ 1.13
Hmgcs2P54869 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.08■■□□□ 1.13
Hmgcs2P54869 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.08■■□□□ 1.12
Hmgcs2P54869 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Hmgcs2P54869 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Hmgcs2P54869 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Hmgcs2P54869 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hmgcs2P54869 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hmgcs2P54869 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.07■■□□□ 1.12
Hmgcs2P54869 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.07■■□□□ 1.12
Hmgcs2P54869 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.07■■□□□ 1.12
Hmgcs2P54869 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hmgcs2P54869 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Hmgcs2P54869 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs2P54869 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs2P54869 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.06■■□□□ 1.12
Hmgcs2P54869 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs2P54869 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs2P54869 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs2P54869 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.06■■□□□ 1.12
Hmgcs2P54869 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
Hmgcs2P54869 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs2P54869 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs2P54869 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs2P54869 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hmgcs2P54869 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.05■■□□□ 1.12
Hmgcs2P54869 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.05■■□□□ 1.12
Hmgcs2P54869 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Hmgcs2P54869 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmgcs2P54869 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmgcs2P54869 Mir5133-201ENSMUST00000174955 77 ntBASIC22.04■■□□□ 1.12
Hmgcs2P54869 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.04■■□□□ 1.12
Hmgcs2P54869 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Hmgcs2P54869 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.04■■□□□ 1.12
Hmgcs2P54869 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmgcs2P54869 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.04■■□□□ 1.12
Hmgcs2P54869 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmgcs2P54869 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hmgcs2P54869 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.03■■□□□ 1.12
Hmgcs2P54869 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hmgcs2P54869 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hmgcs2P54869 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hmgcs2P54869 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hmgcs2P54869 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hmgcs2P54869 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Hmgcs2P54869 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.02■■□□□ 1.12
Hmgcs2P54869 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hmgcs2P54869 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hmgcs2P54869 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hmgcs2P54869 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Hmgcs2P54869 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Hmgcs2P54869 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.01■■□□□ 1.11
Hmgcs2P54869 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs2P54869 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs2P54869 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms