Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Gm13148-201ENSMUST00000118892 745 ntBASIC20.79■□□□□ 0.92
Ephb3P54754 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.79■□□□□ 0.92
Ephb3P54754 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ephb3P54754 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ephb3P54754 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ephb3P54754 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ephb3P54754 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.78■□□□□ 0.92
Ephb3P54754 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ephb3P54754 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ephb3P54754 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ephb3P54754 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ephb3P54754 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ephb3P54754 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ephb3P54754 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.78■□□□□ 0.92
Ephb3P54754 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ephb3P54754 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ephb3P54754 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ephb3P54754 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Ephb3P54754 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ephb3P54754 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ephb3P54754 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.77■□□□□ 0.92
Ephb3P54754 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.77■□□□□ 0.92
Ephb3P54754 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ephb3P54754 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.77■□□□□ 0.91
Ephb3P54754 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
Ephb3P54754 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ephb3P54754 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ephb3P54754 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ephb3P54754 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ephb3P54754 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Ephb3P54754 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ephb3P54754 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ephb3P54754 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ephb3P54754 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Ephb3P54754 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.75■□□□□ 0.91
Ephb3P54754 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 Mir7071-201ENSMUST00000184847 69 ntBASIC20.75■□□□□ 0.91
Ephb3P54754 Gm8520-201ENSMUST00000186517 868 ntBASIC20.75■□□□□ 0.91
Ephb3P54754 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ephb3P54754 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ephb3P54754 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ephb3P54754 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ephb3P54754 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ephb3P54754 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ephb3P54754 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ephb3P54754 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.74■□□□□ 0.91
Ephb3P54754 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.74■□□□□ 0.91
Ephb3P54754 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ephb3P54754 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ephb3P54754 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ephb3P54754 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ephb3P54754 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ephb3P54754 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ephb3P54754 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ephb3P54754 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.73■□□□□ 0.91
Ephb3P54754 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ephb3P54754 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ephb3P54754 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.73■□□□□ 0.91
Ephb3P54754 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ephb3P54754 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.73■□□□□ 0.91
Ephb3P54754 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ephb3P54754 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ephb3P54754 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ephb3P54754 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.72■□□□□ 0.91
Ephb3P54754 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ephb3P54754 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ephb3P54754 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ephb3P54754 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Ephb3P54754 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.72■□□□□ 0.91
Ephb3P54754 Gm5408-201ENSMUST00000197998 747 ntBASIC20.72■□□□□ 0.91
Ephb3P54754 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ephb3P54754 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ephb3P54754 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.71■□□□□ 0.91
Ephb3P54754 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.71■□□□□ 0.91
Ephb3P54754 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ephb3P54754 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ephb3P54754 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ephb3P54754 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ephb3P54754 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.7■□□□□ 0.9
Ephb3P54754 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.7■□□□□ 0.9
Ephb3P54754 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ephb3P54754 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.7■□□□□ 0.9
Ephb3P54754 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ephb3P54754 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ephb3P54754 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ephb3P54754 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ephb3P54754 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ephb3P54754 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ephb3P54754 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ephb3P54754 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Ephb3P54754 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ephb3P54754 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms