Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Lhx3P50481 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx3P50481 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.12■□□□□ 0.81
Lhx3P50481 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Lhx3P50481 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx3P50481 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.12■□□□□ 0.81
Lhx3P50481 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx3P50481 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx3P50481 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx3P50481 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx3P50481 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx3P50481 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx3P50481 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lhx3P50481 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx3P50481 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx3P50481 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx3P50481 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx3P50481 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lhx3P50481 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Lhx3P50481 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx3P50481 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Lhx3P50481 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.1■□□□□ 0.81
Lhx3P50481 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.1■□□□□ 0.81
Lhx3P50481 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx3P50481 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lhx3P50481 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Lhx3P50481 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.1■□□□□ 0.81
Lhx3P50481 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx3P50481 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx3P50481 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.1■□□□□ 0.81
Lhx3P50481 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx3P50481 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Lhx3P50481 Gm11421-201ENSMUST00000122124 294 ntBASIC20.09■□□□□ 0.81
Lhx3P50481 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx3P50481 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx3P50481 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx3P50481 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx3P50481 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx3P50481 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx3P50481 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx3P50481 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx3P50481 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx3P50481 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx3P50481 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Lhx3P50481 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Lhx3P50481 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lhx3P50481 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx3P50481 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.07■□□□□ 0.8
Lhx3P50481 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lhx3P50481 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx3P50481 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx3P50481 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx3P50481 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx3P50481 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx3P50481 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx3P50481 AA386476-201ENSMUST00000098781 1665 ntBASIC20.07■□□□□ 0.8
Lhx3P50481 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx3P50481 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx3P50481 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx3P50481 Gm43060-201ENSMUST00000200621 289 ntBASIC20.06■□□□□ 0.8
Lhx3P50481 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.06■□□□□ 0.8
Lhx3P50481 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
Lhx3P50481 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx3P50481 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Lhx3P50481 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx3P50481 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Lhx3P50481 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx3P50481 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx3P50481 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx3P50481 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.05■□□□□ 0.8
Lhx3P50481 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lhx3P50481 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lhx3P50481 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Lhx3P50481 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx3P50481 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lhx3P50481 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lhx3P50481 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.04■□□□□ 0.8
Lhx3P50481 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx3P50481 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.04■□□□□ 0.8
Lhx3P50481 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx3P50481 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms