Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GdnfP48540 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
GdnfP48540 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GdnfP48540 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.18■□□□□ 0.34
GdnfP48540 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.18■□□□□ 0.34
GdnfP48540 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GdnfP48540 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.18■□□□□ 0.34
GdnfP48540 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.18■□□□□ 0.34
GdnfP48540 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GdnfP48540 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
GdnfP48540 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
GdnfP48540 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GdnfP48540 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GdnfP48540 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GdnfP48540 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GdnfP48540 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GdnfP48540 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.17■□□□□ 0.34
GdnfP48540 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.17■□□□□ 0.34
GdnfP48540 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GdnfP48540 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GdnfP48540 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GdnfP48540 Gm9959-201ENSMUST00000068277 390 ntBASIC17.17■□□□□ 0.34
GdnfP48540 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GdnfP48540 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GdnfP48540 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GdnfP48540 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GdnfP48540 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GdnfP48540 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GdnfP48540 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GdnfP48540 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GdnfP48540 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GdnfP48540 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GdnfP48540 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GdnfP48540 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GdnfP48540 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GdnfP48540 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GdnfP48540 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.15■□□□□ 0.34
GdnfP48540 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.15■□□□□ 0.34
GdnfP48540 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GdnfP48540 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GdnfP48540 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GdnfP48540 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GdnfP48540 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GdnfP48540 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GdnfP48540 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GdnfP48540 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GdnfP48540 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GdnfP48540 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.14■□□□□ 0.33
GdnfP48540 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.14■□□□□ 0.33
GdnfP48540 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GdnfP48540 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.13■□□□□ 0.33
GdnfP48540 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GdnfP48540 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GdnfP48540 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GdnfP48540 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GdnfP48540 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GdnfP48540 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GdnfP48540 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GdnfP48540 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GdnfP48540 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
GdnfP48540 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GdnfP48540 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GdnfP48540 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.13■□□□□ 0.33
GdnfP48540 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GdnfP48540 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GdnfP48540 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GdnfP48540 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.12■□□□□ 0.33
GdnfP48540 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GdnfP48540 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.12■□□□□ 0.33
GdnfP48540 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GdnfP48540 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GdnfP48540 Etf1-202ENSMUST00000180351 108 ntBASIC17.12■□□□□ 0.33
GdnfP48540 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.12■□□□□ 0.33
GdnfP48540 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GdnfP48540 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GdnfP48540 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.12■□□□□ 0.33
GdnfP48540 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GdnfP48540 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
GdnfP48540 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.11■□□□□ 0.33
GdnfP48540 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.11■□□□□ 0.33
GdnfP48540 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GdnfP48540 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GdnfP48540 Golph3-205ENSMUST00000228671 2842 ntBASIC17.11■□□□□ 0.33
GdnfP48540 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GdnfP48540 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.1■□□□□ 0.33
GdnfP48540 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GdnfP48540 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GdnfP48540 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GdnfP48540 Gm14117-201ENSMUST00000122417 843 ntBASIC17.1■□□□□ 0.33
GdnfP48540 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.1■□□□□ 0.33
GdnfP48540 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms