Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkn1aP39689 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkn1aP39689 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkn1aP39689 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Cdkn1aP39689 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkn1aP39689 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkn1aP39689 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkn1aP39689 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkn1aP39689 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.28■□□□□ 0.2
Cdkn1aP39689 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdkn1aP39689 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.27■□□□□ 0.2
Cdkn1aP39689 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdkn1aP39689 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkn1aP39689 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdkn1aP39689 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdkn1aP39689 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdkn1aP39689 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdkn1aP39689 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cdkn1aP39689 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdkn1aP39689 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Gm10493-201ENSMUST00000097270 612 ntBASIC16.26■□□□□ 0.19
Cdkn1aP39689 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.26■□□□□ 0.19
Cdkn1aP39689 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkn1aP39689 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkn1aP39689 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkn1aP39689 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkn1aP39689 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkn1aP39689 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkn1aP39689 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkn1aP39689 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkn1aP39689 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.25■□□□□ 0.19
Cdkn1aP39689 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkn1aP39689 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.25■□□□□ 0.19
Cdkn1aP39689 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.24■□□□□ 0.19
Cdkn1aP39689 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.24■□□□□ 0.19
Cdkn1aP39689 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.24■□□□□ 0.19
Cdkn1aP39689 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdkn1aP39689 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.23■□□□□ 0.19
Cdkn1aP39689 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.23■□□□□ 0.19
Cdkn1aP39689 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkn1aP39689 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms