Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh4P39038 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cdh4P39038 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Cdh4P39038 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh4P39038 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh4P39038 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh4P39038 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh4P39038 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh4P39038 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Cdh4P39038 Gm15039-201ENSMUST00000118914 875 ntBASIC18.84■□□□□ 0.61
Cdh4P39038 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.84■□□□□ 0.61
Cdh4P39038 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh4P39038 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh4P39038 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh4P39038 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh4P39038 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh4P39038 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cdh4P39038 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh4P39038 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh4P39038 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cdh4P39038 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh4P39038 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh4P39038 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Cdh4P39038 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh4P39038 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh4P39038 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cdh4P39038 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.83■□□□□ 0.6
Cdh4P39038 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cdh4P39038 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh4P39038 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh4P39038 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh4P39038 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh4P39038 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh4P39038 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh4P39038 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh4P39038 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdh4P39038 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.82■□□□□ 0.6
Cdh4P39038 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Cdh4P39038 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh4P39038 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdh4P39038 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Cdh4P39038 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh4P39038 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh4P39038 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.8■□□□□ 0.6
Cdh4P39038 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdh4P39038 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh4P39038 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.8■□□□□ 0.6
Cdh4P39038 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh4P39038 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cdh4P39038 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh4P39038 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdh4P39038 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh4P39038 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh4P39038 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh4P39038 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh4P39038 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh4P39038 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh4P39038 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.79■□□□□ 0.6
Cdh4P39038 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdh4P39038 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh4P39038 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh4P39038 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh4P39038 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh4P39038 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh4P39038 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh4P39038 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh4P39038 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdh4P39038 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh4P39038 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.78■□□□□ 0.6
Cdh4P39038 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.78■□□□□ 0.6
Cdh4P39038 Gm43173-201ENSMUST00000202246 593 ntBASIC18.78■□□□□ 0.6
Cdh4P39038 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh4P39038 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh4P39038 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh4P39038 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.77■□□□□ 0.6
Cdh4P39038 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh4P39038 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh4P39038 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cdh4P39038 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdh4P39038 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdh4P39038 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh4P39038 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Cdh4P39038 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh4P39038 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh4P39038 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cdh4P39038 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh4P39038 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh4P39038 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh4P39038 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh4P39038 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms