Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.6■□□□□ 0.73
LdlrP35951 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LdlrP35951 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LdlrP35951 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LdlrP35951 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LdlrP35951 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LdlrP35951 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LdlrP35951 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LdlrP35951 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.59■□□□□ 0.73
LdlrP35951 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LdlrP35951 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LdlrP35951 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
LdlrP35951 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
LdlrP35951 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
LdlrP35951 Gm12821-201ENSMUST00000120022 600 ntBASIC19.58■□□□□ 0.72
LdlrP35951 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LdlrP35951 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.58■□□□□ 0.72
LdlrP35951 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LdlrP35951 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LdlrP35951 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LdlrP35951 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LdlrP35951 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LdlrP35951 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LdlrP35951 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.57■□□□□ 0.72
LdlrP35951 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.57■□□□□ 0.72
LdlrP35951 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LdlrP35951 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LdlrP35951 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LdlrP35951 Gm10399-202ENSMUST00000202768 748 ntBASIC19.57■□□□□ 0.72
LdlrP35951 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.57■□□□□ 0.72
LdlrP35951 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LdlrP35951 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LdlrP35951 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LdlrP35951 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LdlrP35951 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LdlrP35951 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LdlrP35951 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.56■□□□□ 0.72
LdlrP35951 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LdlrP35951 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LdlrP35951 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LdlrP35951 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LdlrP35951 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LdlrP35951 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LdlrP35951 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LdlrP35951 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LdlrP35951 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LdlrP35951 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LdlrP35951 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LdlrP35951 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.55■□□□□ 0.72
LdlrP35951 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LdlrP35951 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.54■□□□□ 0.72
LdlrP35951 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LdlrP35951 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LdlrP35951 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.54■□□□□ 0.72
LdlrP35951 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LdlrP35951 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LdlrP35951 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LdlrP35951 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.54■□□□□ 0.72
LdlrP35951 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LdlrP35951 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LdlrP35951 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LdlrP35951 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LdlrP35951 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LdlrP35951 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LdlrP35951 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LdlrP35951 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LdlrP35951 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LdlrP35951 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LdlrP35951 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LdlrP35951 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LdlrP35951 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LdlrP35951 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LdlrP35951 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LdlrP35951 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LdlrP35951 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LdlrP35951 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LdlrP35951 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LdlrP35951 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LdlrP35951 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LdlrP35951 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LdlrP35951 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LdlrP35951 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.52■□□□□ 0.72
LdlrP35951 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.52■□□□□ 0.72
LdlrP35951 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LdlrP35951 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LdlrP35951 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LdlrP35951 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
LdlrP35951 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Gm27454-201ENSMUST00000185090 204 ntBASIC19.51■□□□□ 0.71
LdlrP35951 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Gm7143-201ENSMUST00000222811 859 ntBASIC19.51■□□□□ 0.71
LdlrP35951 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms