Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Thbs1P35441 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thbs1P35441 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.23■□□□□ 0.51
Thbs1P35441 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Thbs1P35441 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Thbs1P35441 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thbs1P35441 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thbs1P35441 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Thbs1P35441 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thbs1P35441 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.23■□□□□ 0.51
Thbs1P35441 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thbs1P35441 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Thbs1P35441 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thbs1P35441 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thbs1P35441 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thbs1P35441 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thbs1P35441 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.22■□□□□ 0.51
Thbs1P35441 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.22■□□□□ 0.51
Thbs1P35441 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.22■□□□□ 0.51
Thbs1P35441 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Thbs1P35441 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thbs1P35441 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Thbs1P35441 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thbs1P35441 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Thbs1P35441 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thbs1P35441 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Thbs1P35441 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Gm12922-201ENSMUST00000120626 809 ntBASIC18.21■□□□□ 0.51
Thbs1P35441 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Thbs1P35441 Gm13241-201ENSMUST00000094493 780 ntBASIC18.21■□□□□ 0.51
Thbs1P35441 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thbs1P35441 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thbs1P35441 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thbs1P35441 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.2■□□□□ 0.5
Thbs1P35441 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.2■□□□□ 0.5
Thbs1P35441 Golgb1-201ENSMUST00000023534 498 ntBASIC18.2■□□□□ 0.5
Thbs1P35441 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thbs1P35441 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thbs1P35441 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thbs1P35441 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thbs1P35441 Golph3-202ENSMUST00000226517 2359 ntBASIC18.19■□□□□ 0.5
Thbs1P35441 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.19■□□□□ 0.5
Thbs1P35441 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thbs1P35441 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thbs1P35441 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thbs1P35441 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thbs1P35441 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thbs1P35441 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thbs1P35441 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thbs1P35441 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Thbs1P35441 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thbs1P35441 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.18■□□□□ 0.5
Thbs1P35441 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thbs1P35441 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thbs1P35441 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thbs1P35441 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Thbs1P35441 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thbs1P35441 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.17■□□□□ 0.5
Thbs1P35441 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Thbs1P35441 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.17■□□□□ 0.5
Thbs1P35441 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thbs1P35441 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thbs1P35441 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thbs1P35441 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thbs1P35441 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.16■□□□□ 0.5
Thbs1P35441 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.16■□□□□ 0.5
Thbs1P35441 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Thbs1P35441 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thbs1P35441 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thbs1P35441 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Thbs1P35441 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thbs1P35441 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Thbs1P35441 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.16■□□□□ 0.5
Thbs1P35441 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thbs1P35441 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.16■□□□□ 0.5
Thbs1P35441 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Thbs1P35441 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.15■□□□□ 0.5
Thbs1P35441 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thbs1P35441 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Thbs1P35441 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Thbs1P35441 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Thbs1P35441 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms