Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Slc6a1P31648 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a1P31648 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a1P31648 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Slc6a1P31648 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a1P31648 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a1P31648 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a1P31648 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a1P31648 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Slc6a1P31648 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc6a1P31648 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Slc6a1P31648 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.9■□□□□ 0.3
Slc6a1P31648 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a1P31648 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a1P31648 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a1P31648 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Slc6a1P31648 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
Slc6a1P31648 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.89■□□□□ 0.29
Slc6a1P31648 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.89■□□□□ 0.29
Slc6a1P31648 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a1P31648 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a1P31648 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a1P31648 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.89■□□□□ 0.29
Slc6a1P31648 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a1P31648 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a1P31648 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a1P31648 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.88■□□□□ 0.29
Slc6a1P31648 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Slc6a1P31648 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.88■□□□□ 0.29
Slc6a1P31648 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Slc6a1P31648 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.88■□□□□ 0.29
Slc6a1P31648 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
Slc6a1P31648 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc6a1P31648 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a1P31648 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a1P31648 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a1P31648 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Slc6a1P31648 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a1P31648 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.87■□□□□ 0.29
Slc6a1P31648 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Slc6a1P31648 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a1P31648 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a1P31648 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.86■□□□□ 0.29
Slc6a1P31648 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.86■□□□□ 0.29
Slc6a1P31648 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.86■□□□□ 0.29
Slc6a1P31648 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Slc6a1P31648 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Slc6a1P31648 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.86■□□□□ 0.29
Slc6a1P31648 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.86■□□□□ 0.29
Slc6a1P31648 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a1P31648 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a1P31648 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a1P31648 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a1P31648 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a1P31648 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a1P31648 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.85■□□□□ 0.29
Slc6a1P31648 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a1P31648 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a1P31648 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Slc6a1P31648 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a1P31648 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Slc6a1P31648 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a1P31648 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Slc6a1P31648 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Slc6a1P31648 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a1P31648 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Slc6a1P31648 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms