Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nfkb1P25799 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nfkb1P25799 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nfkb1P25799 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nfkb1P25799 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nfkb1P25799 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.28■□□□□ 0.84
Nfkb1P25799 Gm42642-201ENSMUST00000200683 355 ntBASIC20.28■□□□□ 0.84
Nfkb1P25799 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Nfkb1P25799 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Nfkb1P25799 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nfkb1P25799 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nfkb1P25799 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nfkb1P25799 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.27■□□□□ 0.84
Nfkb1P25799 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Nfkb1P25799 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Nfkb1P25799 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nfkb1P25799 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nfkb1P25799 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nfkb1P25799 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.27■□□□□ 0.84
Nfkb1P25799 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nfkb1P25799 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nfkb1P25799 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nfkb1P25799 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nfkb1P25799 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nfkb1P25799 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nfkb1P25799 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfkb1P25799 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Nfkb1P25799 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfkb1P25799 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfkb1P25799 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nfkb1P25799 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfkb1P25799 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfkb1P25799 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfkb1P25799 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfkb1P25799 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nfkb1P25799 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfkb1P25799 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nfkb1P25799 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nfkb1P25799 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfkb1P25799 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.25■□□□□ 0.83
Nfkb1P25799 Gm42569-201ENSMUST00000200539 472 ntBASIC20.25■□□□□ 0.83
Nfkb1P25799 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfkb1P25799 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.25■□□□□ 0.83
Nfkb1P25799 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfkb1P25799 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfkb1P25799 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfkb1P25799 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfkb1P25799 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nfkb1P25799 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nfkb1P25799 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Nfkb1P25799 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.24■□□□□ 0.83
Nfkb1P25799 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfkb1P25799 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfkb1P25799 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nfkb1P25799 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nfkb1P25799 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfkb1P25799 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nfkb1P25799 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfkb1P25799 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nfkb1P25799 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nfkb1P25799 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfkb1P25799 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nfkb1P25799 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfkb1P25799 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfkb1P25799 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nfkb1P25799 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfkb1P25799 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nfkb1P25799 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nfkb1P25799 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfkb1P25799 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfkb1P25799 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfkb1P25799 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nfkb1P25799 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Nfkb1P25799 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfkb1P25799 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Nfkb1P25799 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.21■□□□□ 0.83
Nfkb1P25799 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nfkb1P25799 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfkb1P25799 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfkb1P25799 Gm7291-201ENSMUST00000199147 382 ntBASIC20.21■□□□□ 0.83
Nfkb1P25799 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.21■□□□□ 0.83
Nfkb1P25799 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfkb1P25799 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nfkb1P25799 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nfkb1P25799 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfkb1P25799 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nfkb1P25799 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfkb1P25799 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfkb1P25799 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfkb1P25799 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Nfkb1P25799 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.2■□□□□ 0.82
Nfkb1P25799 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nfkb1P25799 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nfkb1P25799 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfkb1P25799 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.2■□□□□ 0.82
Nfkb1P25799 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nfkb1P25799 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Nfkb1P25799 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfkb1P25799 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfkb1P25799 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms