Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChrneP20782 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.61■□□□□ 0.57
ChrneP20782 Golph3-202ENSMUST00000226517 2359 ntBASIC18.61■□□□□ 0.57
ChrneP20782 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChrneP20782 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ChrneP20782 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ChrneP20782 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.6■□□□□ 0.57
ChrneP20782 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChrneP20782 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
ChrneP20782 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChrneP20782 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChrneP20782 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ChrneP20782 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.6■□□□□ 0.57
ChrneP20782 Mir6236-201ENSMUST00000184437 123 ntBASIC18.6■□□□□ 0.57
ChrneP20782 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ChrneP20782 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
ChrneP20782 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChrneP20782 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChrneP20782 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ChrneP20782 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ChrneP20782 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChrneP20782 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ChrneP20782 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.59■□□□□ 0.57
ChrneP20782 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Mir7075-201ENSMUST00000184187 82 ntBASIC18.59■□□□□ 0.57
ChrneP20782 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChrneP20782 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ChrneP20782 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.58■□□□□ 0.57
ChrneP20782 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ChrneP20782 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ChrneP20782 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.58■□□□□ 0.56
ChrneP20782 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ChrneP20782 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ChrneP20782 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.58■□□□□ 0.56
ChrneP20782 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ChrneP20782 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
ChrneP20782 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.58■□□□□ 0.56
ChrneP20782 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ChrneP20782 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChrneP20782 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ChrneP20782 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChrneP20782 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChrneP20782 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ChrneP20782 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ChrneP20782 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.57■□□□□ 0.56
ChrneP20782 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ChrneP20782 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ChrneP20782 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChrneP20782 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ChrneP20782 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ChrneP20782 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ChrneP20782 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ChrneP20782 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ChrneP20782 Gm6139-201ENSMUST00000079261 882 ntBASIC18.56■□□□□ 0.56
ChrneP20782 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ChrneP20782 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ChrneP20782 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChrneP20782 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ChrneP20782 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChrneP20782 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChrneP20782 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChrneP20782 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ChrneP20782 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChrneP20782 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ChrneP20782 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChrneP20782 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ChrneP20782 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.55■□□□□ 0.56
ChrneP20782 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ChrneP20782 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ChrneP20782 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.54■□□□□ 0.56
ChrneP20782 Gm8493-201ENSMUST00000196881 489 ntBASIC18.54■□□□□ 0.56
ChrneP20782 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ChrneP20782 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ChrneP20782 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ChrneP20782 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ChrneP20782 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChrneP20782 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChrneP20782 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
ChrneP20782 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.53■□□□□ 0.56
ChrneP20782 Spcs1-204ENSMUST00000226782 949 ntBASIC18.53■□□□□ 0.56
ChrneP20782 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ChrneP20782 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms