Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgn1P18608 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgn1P18608 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgn1P18608 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgn1P18608 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.04■□□□□ 0.48
Hmgn1P18608 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Hmgn1P18608 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Hmgn1P18608 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.03■□□□□ 0.48
Hmgn1P18608 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn1P18608 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn1P18608 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Hmgn1P18608 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn1P18608 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn1P18608 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.03■□□□□ 0.48
Hmgn1P18608 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn1P18608 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn1P18608 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hmgn1P18608 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn1P18608 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.02■□□□□ 0.48
Hmgn1P18608 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn1P18608 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn1P18608 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn1P18608 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hmgn1P18608 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hmgn1P18608 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Hmgn1P18608 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hmgn1P18608 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hmgn1P18608 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hmgn1P18608 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn1P18608 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn1P18608 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn1P18608 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Hmgn1P18608 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.01■□□□□ 0.47
Hmgn1P18608 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn1P18608 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn1P18608 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn1P18608 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18■□□□□ 0.47
Hmgn1P18608 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn1P18608 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn1P18608 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn1P18608 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hmgn1P18608 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgn1P18608 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn1P18608 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn1P18608 Gm13238-201ENSMUST00000117655 780 ntBASIC18■□□□□ 0.47
Hmgn1P18608 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18■□□□□ 0.47
Hmgn1P18608 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18■□□□□ 0.47
Hmgn1P18608 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18■□□□□ 0.47
Hmgn1P18608 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18■□□□□ 0.47
Hmgn1P18608 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn1P18608 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn1P18608 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn1P18608 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn1P18608 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn1P18608 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.99■□□□□ 0.47
Hmgn1P18608 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.99■□□□□ 0.47
Hmgn1P18608 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn1P18608 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn1P18608 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn1P18608 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn1P18608 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn1P18608 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn1P18608 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn1P18608 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn1P18608 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn1P18608 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn1P18608 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.98■□□□□ 0.47
Hmgn1P18608 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hmgn1P18608 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn1P18608 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn1P18608 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hmgn1P18608 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hmgn1P18608 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.98■□□□□ 0.47
Hmgn1P18608 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn1P18608 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.97■□□□□ 0.47
Hmgn1P18608 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgn1P18608 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgn1P18608 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hmgn1P18608 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgn1P18608 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgn1P18608 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hmgn1P18608 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn1P18608 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Hmgn1P18608 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn1P18608 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn1P18608 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgn1P18608 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn1P18608 Gm10232-201ENSMUST00000089221 720 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms