Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cntn1P12960 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.94■□□□□ 0.62
Cntn1P12960 Gm43060-201ENSMUST00000200621 289 ntBASIC18.94■□□□□ 0.62
Cntn1P12960 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Cntn1P12960 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cntn1P12960 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cntn1P12960 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cntn1P12960 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cntn1P12960 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cntn1P12960 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cntn1P12960 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cntn1P12960 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cntn1P12960 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cntn1P12960 Gm18284-201ENSMUST00000172604 624 ntBASIC18.92■□□□□ 0.62
Cntn1P12960 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cntn1P12960 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cntn1P12960 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cntn1P12960 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cntn1P12960 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cntn1P12960 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cntn1P12960 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.91■□□□□ 0.62
Cntn1P12960 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cntn1P12960 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Cntn1P12960 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Cntn1P12960 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Cntn1P12960 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.9■□□□□ 0.62
Cntn1P12960 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.9■□□□□ 0.62
Cntn1P12960 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Cntn1P12960 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cntn1P12960 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cntn1P12960 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cntn1P12960 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cntn1P12960 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cntn1P12960 Gm8495-201ENSMUST00000188740 694 ntBASIC18.89■□□□□ 0.61
Cntn1P12960 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cntn1P12960 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cntn1P12960 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cntn1P12960 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cntn1P12960 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cntn1P12960 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cntn1P12960 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Cntn1P12960 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cntn1P12960 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cntn1P12960 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cntn1P12960 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cntn1P12960 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cntn1P12960 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cntn1P12960 Notumos-201ENSMUST00000151998 2659 ntBASIC18.87■□□□□ 0.61
Cntn1P12960 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cntn1P12960 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cntn1P12960 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cntn1P12960 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.86■□□□□ 0.61
Cntn1P12960 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cntn1P12960 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.86■□□□□ 0.61
Cntn1P12960 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.86■□□□□ 0.61
Cntn1P12960 Gm11421-201ENSMUST00000122124 294 ntBASIC18.86■□□□□ 0.61
Cntn1P12960 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cntn1P12960 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cntn1P12960 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cntn1P12960 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cntn1P12960 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cntn1P12960 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cntn1P12960 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cntn1P12960 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cntn1P12960 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cntn1P12960 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.85■□□□□ 0.61
Cntn1P12960 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Cntn1P12960 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cntn1P12960 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cntn1P12960 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cntn1P12960 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cntn1P12960 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.85■□□□□ 0.61
Cntn1P12960 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cntn1P12960 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cntn1P12960 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cntn1P12960 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cntn1P12960 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cntn1P12960 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cntn1P12960 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms