Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sod1P08228 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sod1P08228 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sod1P08228 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sod1P08228 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sod1P08228 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sod1P08228 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sod1P08228 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sod1P08228 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sod1P08228 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sod1P08228 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.74■□□□□ 0.59
Sod1P08228 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sod1P08228 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.74■□□□□ 0.59
Sod1P08228 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sod1P08228 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sod1P08228 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sod1P08228 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sod1P08228 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sod1P08228 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.73■□□□□ 0.59
Sod1P08228 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sod1P08228 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sod1P08228 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sod1P08228 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.73■□□□□ 0.59
Sod1P08228 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sod1P08228 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sod1P08228 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Sod1P08228 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sod1P08228 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.72■□□□□ 0.59
Sod1P08228 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sod1P08228 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.72■□□□□ 0.59
Sod1P08228 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sod1P08228 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sod1P08228 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sod1P08228 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sod1P08228 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sod1P08228 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sod1P08228 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sod1P08228 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sod1P08228 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sod1P08228 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sod1P08228 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sod1P08228 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sod1P08228 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sod1P08228 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Sod1P08228 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.71■□□□□ 0.59
Sod1P08228 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.71■□□□□ 0.59
Sod1P08228 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sod1P08228 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sod1P08228 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sod1P08228 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sod1P08228 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sod1P08228 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sod1P08228 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sod1P08228 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sod1P08228 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.7■□□□□ 0.58
Sod1P08228 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.7■□□□□ 0.58
Sod1P08228 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sod1P08228 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sod1P08228 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sod1P08228 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sod1P08228 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sod1P08228 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sod1P08228 Mir5133-201ENSMUST00000174955 77 ntBASIC18.69■□□□□ 0.58
Sod1P08228 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Sod1P08228 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.69■□□□□ 0.58
Sod1P08228 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sod1P08228 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sod1P08228 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sod1P08228 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sod1P08228 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sod1P08228 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sod1P08228 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sod1P08228 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Sod1P08228 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sod1P08228 Gm38205-201ENSMUST00000192243 258 ntBASIC18.68■□□□□ 0.58
Sod1P08228 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sod1P08228 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sod1P08228 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.68■□□□□ 0.58
Sod1P08228 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sod1P08228 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Sod1P08228 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Sod1P08228 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sod1P08228 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sod1P08228 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.67■□□□□ 0.58
Sod1P08228 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.67■□□□□ 0.58
Sod1P08228 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.67■□□□□ 0.58
Sod1P08228 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.67■□□□□ 0.58
Sod1P08228 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sod1P08228 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sod1P08228 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sod1P08228 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Sod1P08228 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.66■□□□□ 0.58
Sod1P08228 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sod1P08228 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sod1P08228 Gm12441-201ENSMUST00000121806 588 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms