Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.03■□□□□ 0.96
TnfP06804 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.03■□□□□ 0.96
TnfP06804 Gm42642-201ENSMUST00000200683 355 ntBASIC21.03■□□□□ 0.96
TnfP06804 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
TnfP06804 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TnfP06804 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.03■□□□□ 0.96
TnfP06804 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.03■□□□□ 0.96
TnfP06804 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TnfP06804 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TnfP06804 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TnfP06804 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TnfP06804 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
TnfP06804 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TnfP06804 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TnfP06804 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.02■□□□□ 0.96
TnfP06804 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TnfP06804 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TnfP06804 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TnfP06804 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TnfP06804 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TnfP06804 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.01■□□□□ 0.95
TnfP06804 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TnfP06804 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TnfP06804 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.01■□□□□ 0.95
TnfP06804 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TnfP06804 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TnfP06804 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.01■□□□□ 0.95
TnfP06804 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TnfP06804 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TnfP06804 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TnfP06804 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TnfP06804 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TnfP06804 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21■□□□□ 0.95
TnfP06804 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TnfP06804 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TnfP06804 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TnfP06804 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21■□□□□ 0.95
TnfP06804 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TnfP06804 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21■□□□□ 0.95
TnfP06804 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TnfP06804 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.99■□□□□ 0.95
TnfP06804 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TnfP06804 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.99■□□□□ 0.95
TnfP06804 Gm26571-201ENSMUST00000181399 666 ntBASIC20.99■□□□□ 0.95
TnfP06804 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TnfP06804 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TnfP06804 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TnfP06804 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TnfP06804 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TnfP06804 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TnfP06804 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TnfP06804 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TnfP06804 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TnfP06804 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TnfP06804 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TnfP06804 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TnfP06804 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TnfP06804 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TnfP06804 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TnfP06804 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TnfP06804 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TnfP06804 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.97■□□□□ 0.95
TnfP06804 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TnfP06804 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TnfP06804 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TnfP06804 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.97■□□□□ 0.95
TnfP06804 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.96■□□□□ 0.95
TnfP06804 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TnfP06804 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TnfP06804 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.96■□□□□ 0.95
TnfP06804 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.96■□□□□ 0.95
TnfP06804 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TnfP06804 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TnfP06804 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TnfP06804 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TnfP06804 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TnfP06804 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TnfP06804 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TnfP06804 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TnfP06804 Gm27801-201ENSMUST00000184174 223 ntBASIC20.95■□□□□ 0.94
TnfP06804 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TnfP06804 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TnfP06804 Gm9988-201ENSMUST00000069786 435 ntBASIC20.95■□□□□ 0.94
TnfP06804 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TnfP06804 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TnfP06804 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.94■□□□□ 0.94
TnfP06804 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.94■□□□□ 0.94
TnfP06804 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TnfP06804 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TnfP06804 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TnfP06804 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TnfP06804 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
TnfP06804 Gm42778-201ENSMUST00000199644 553 ntBASIC20.94■□□□□ 0.94
TnfP06804 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TnfP06804 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TnfP06804 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TnfP06804 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TnfP06804 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TnfP06804 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TnfP06804 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms