Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
P06336 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Gm12251-201ENSMUST00000117893 792 ntBASIC18.21■□□□□ 0.51
P06336 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.21■□□□□ 0.51
P06336 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06336 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
P06336 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
P06336 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
P06336 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
P06336 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06336 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
P06336 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
P06336 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
P06336 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.19■□□□□ 0.5
P06336 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.19■□□□□ 0.5
P06336 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.19■□□□□ 0.5
P06336 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06336 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
P06336 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Gm8493-201ENSMUST00000196881 489 ntBASIC18.18■□□□□ 0.5
P06336 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.18■□□□□ 0.5
P06336 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
P06336 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
P06336 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.18■□□□□ 0.5
P06336 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06336 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P06336 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P06336 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
P06336 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P06336 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P06336 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.17■□□□□ 0.5
P06336 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P06336 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.17■□□□□ 0.5
P06336 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.17■□□□□ 0.5
P06336 Gm6139-201ENSMUST00000079261 882 ntBASIC18.17■□□□□ 0.5
P06336 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.17■□□□□ 0.5
P06336 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
P06336 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.17■□□□□ 0.5
P06336 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
P06336 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P06336 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
P06336 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06336 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06336 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06336 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P06336 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P06336 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06336 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06336 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.15■□□□□ 0.5
P06336 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
P06336 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P06336 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.15■□□□□ 0.5
P06336 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06336 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.15■□□□□ 0.5
P06336 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06336 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06336 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P06336 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06336 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06336 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
P06336 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms