Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
P04224 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
P04224 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04224 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
P04224 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.23■□□□□ 0.35
P04224 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
P04224 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
P04224 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.23■□□□□ 0.35
P04224 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.23■□□□□ 0.35
P04224 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
P04224 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04224 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04224 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.22■□□□□ 0.35
P04224 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04224 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04224 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
P04224 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04224 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04224 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
P04224 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04224 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P04224 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
P04224 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04224 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04224 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04224 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.21■□□□□ 0.35
P04224 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04224 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P04224 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04224 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.21■□□□□ 0.35
P04224 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P04224 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04224 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
P04224 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
P04224 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P04224 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
P04224 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04224 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.2■□□□□ 0.34
P04224 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.2■□□□□ 0.34
P04224 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04224 Gm10420-201ENSMUST00000121713 882 ntBASIC17.2■□□□□ 0.34
P04224 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.2■□□□□ 0.34
P04224 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
P04224 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04224 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04224 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
P04224 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04224 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04224 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
P04224 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.19■□□□□ 0.34
P04224 Gm12366-201ENSMUST00000121722 873 ntBASIC17.19■□□□□ 0.34
P04224 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.19■□□□□ 0.34
P04224 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.19■□□□□ 0.34
P04224 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
P04224 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04224 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
P04224 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.19■□□□□ 0.34
P04224 Gm5786-201ENSMUST00000085368 882 ntBASIC17.19■□□□□ 0.34
P04224 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
P04224 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04224 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
P04224 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04224 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04224 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04224 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
P04224 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04224 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
P04224 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04224 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.18■□□□□ 0.34
P04224 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P04224 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
P04224 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
P04224 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04224 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04224 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P04224 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04224 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
P04224 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms