Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04214 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04214 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04214 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04214 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P04214 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04214 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P04214 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.94■□□□□ 0.94
P04214 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
P04214 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04214 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
P04214 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P04214 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04214 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04214 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
P04214 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04214 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.93■□□□□ 0.94
P04214 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
P04214 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
P04214 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04214 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04214 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
P04214 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04214 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
P04214 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.92■□□□□ 0.94
P04214 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
P04214 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04214 Gm38205-201ENSMUST00000192243 258 ntBASIC20.92■□□□□ 0.94
P04214 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04214 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
P04214 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04214 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P04214 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
P04214 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
P04214 Gm6420-201ENSMUST00000193885 723 ntBASIC20.91■□□□□ 0.94
P04214 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P04214 Gm20049-201ENSMUST00000219950 730 ntBASIC20.91■□□□□ 0.94
P04214 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04214 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
P04214 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04214 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04214 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
P04214 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P04214 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.9■□□□□ 0.94
P04214 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.9■□□□□ 0.94
P04214 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.9■□□□□ 0.94
P04214 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P04214 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.9■□□□□ 0.94
P04214 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
P04214 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
P04214 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.89■□□□□ 0.94
P04214 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04214 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04214 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
P04214 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04214 Gm13168-201ENSMUST00000121771 632 ntBASIC20.89■□□□□ 0.93
P04214 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04214 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04214 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04214 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.88■□□□□ 0.93
P04214 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
P04214 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.88■□□□□ 0.93
P04214 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04214 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04214 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04214 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.88■□□□□ 0.93
P04214 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
P04214 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
P04214 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.87■□□□□ 0.93
P04214 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
P04214 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04214 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04214 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04214 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.86■□□□□ 0.93
P04214 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.86■□□□□ 0.93
P04214 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
P04214 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04214 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04214 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04214 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04214 Gm13534-201ENSMUST00000121169 513 ntBASIC20.85■□□□□ 0.93
P04214 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
P04214 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
P04214 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.85■□□□□ 0.93
P04214 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04214 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
P04214 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04214 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04214 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.84■□□□□ 0.93
P04214 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04214 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.84■□□□□ 0.93
P04214 Gm6211-202ENSMUST00000167849 925 ntBASIC20.84■□□□□ 0.93
P04214 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.84■□□□□ 0.93
P04214 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
P04214 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
P04214 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.83■□□□□ 0.93
P04214 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
P04214 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
P04214 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
P04214 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms