Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col4a1P02463 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Col4a1P02463 Gm12933-201ENSMUST00000120203 872 ntBASIC24.73■■□□□ 1.55
Col4a1P02463 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC24.73■■□□□ 1.55
Col4a1P02463 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col4a1P02463 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col4a1P02463 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col4a1P02463 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Col4a1P02463 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
Col4a1P02463 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col4a1P02463 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col4a1P02463 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col4a1P02463 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Col4a1P02463 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Col4a1P02463 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC24.72■■□□□ 1.55
Col4a1P02463 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col4a1P02463 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col4a1P02463 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col4a1P02463 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col4a1P02463 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col4a1P02463 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col4a1P02463 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Col4a1P02463 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col4a1P02463 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col4a1P02463 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col4a1P02463 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Col4a1P02463 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col4a1P02463 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col4a1P02463 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col4a1P02463 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col4a1P02463 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col4a1P02463 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col4a1P02463 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col4a1P02463 Gm13148-201ENSMUST00000118892 745 ntBASIC24.7■■□□□ 1.54
Col4a1P02463 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col4a1P02463 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Col4a1P02463 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Col4a1P02463 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col4a1P02463 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col4a1P02463 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col4a1P02463 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Col4a1P02463 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col4a1P02463 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC24.69■■□□□ 1.54
Col4a1P02463 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col4a1P02463 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col4a1P02463 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Col4a1P02463 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.68■■□□□ 1.54
Col4a1P02463 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col4a1P02463 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC24.68■■□□□ 1.54
Col4a1P02463 Gm13146-201ENSMUST00000118508 780 ntBASIC24.68■■□□□ 1.54
Col4a1P02463 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col4a1P02463 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col4a1P02463 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Col4a1P02463 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col4a1P02463 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col4a1P02463 Gm38205-201ENSMUST00000192243 258 ntBASIC24.67■■□□□ 1.54
Col4a1P02463 Gm7514-201ENSMUST00000209475 934 ntBASIC24.67■■□□□ 1.54
Col4a1P02463 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC24.67■■□□□ 1.54
Col4a1P02463 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col4a1P02463 Gm42911-201ENSMUST00000199360 1630 ntBASIC24.67■■□□□ 1.54
Col4a1P02463 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col4a1P02463 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col4a1P02463 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC24.66■■□□□ 1.54
Col4a1P02463 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC24.66■■□□□ 1.54
Col4a1P02463 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
Col4a1P02463 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col4a1P02463 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Col4a1P02463 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Col4a1P02463 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col4a1P02463 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col4a1P02463 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.66■■□□□ 1.54
Col4a1P02463 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col4a1P02463 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Col4a1P02463 Gm42555-201ENSMUST00000199304 1039 ntBASIC24.66■■□□□ 1.54
Col4a1P02463 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col4a1P02463 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC24.65■■□□□ 1.54
Col4a1P02463 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col4a1P02463 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Col4a1P02463 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col4a1P02463 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col4a1P02463 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col4a1P02463 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col4a1P02463 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col4a1P02463 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC24.64■■□□□ 1.54
Col4a1P02463 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Col4a1P02463 Gm10653-202ENSMUST00000139570 835 ntBASIC24.64■■□□□ 1.53
Col4a1P02463 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC24.64■■□□□ 1.53
Col4a1P02463 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col4a1P02463 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC24.63■■□□□ 1.53
Col4a1P02463 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col4a1P02463 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Col4a1P02463 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col4a1P02463 Gm43859-201ENSMUST00000200075 1412 ntBASIC24.62■■□□□ 1.53
Col4a1P02463 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Col4a1P02463 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col4a1P02463 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Col4a1P02463 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Col4a1P02463 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col4a1P02463 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col4a1P02463 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms