Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
P01878 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01878 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01878 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.56■□□□□ 0.88
P01878 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01878 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01878 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01878 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01878 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01878 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01878 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01878 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
P01878 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
P01878 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01878 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01878 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
P01878 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P01878 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
P01878 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.53■□□□□ 0.88
P01878 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
P01878 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
P01878 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.53■□□□□ 0.88
P01878 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
P01878 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01878 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01878 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01878 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01878 Gm7514-201ENSMUST00000209475 934 ntBASIC20.52■□□□□ 0.88
P01878 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
P01878 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01878 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01878 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
P01878 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01878 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
P01878 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
P01878 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01878 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
P01878 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
P01878 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
P01878 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
P01878 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.51■□□□□ 0.87
P01878 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.51■□□□□ 0.87
P01878 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01878 Gm10602-201ENSMUST00000098239 609 ntBASIC20.51■□□□□ 0.87
P01878 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.51■□□□□ 0.87
P01878 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01878 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.51■□□□□ 0.87
P01878 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01878 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
P01878 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
P01878 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P01878 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P01878 Gm13146-201ENSMUST00000118508 780 ntBASIC20.5■□□□□ 0.87
P01878 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.5■□□□□ 0.87
P01878 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
P01878 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P01878 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P01878 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
P01878 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.5■□□□□ 0.87
P01878 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
P01878 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
P01878 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.49■□□□□ 0.87
P01878 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
P01878 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.49■□□□□ 0.87
P01878 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
P01878 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.49■□□□□ 0.87
P01878 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.49■□□□□ 0.87
P01878 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
P01878 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
P01878 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
P01878 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.49■□□□□ 0.87
P01878 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01878 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01878 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
P01878 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01878 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01878 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01878 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.48■□□□□ 0.87
P01878 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01878 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.48■□□□□ 0.87
P01878 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01878 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01878 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
P01878 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
P01878 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
P01878 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.47■□□□□ 0.87
P01878 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.47■□□□□ 0.87
P01878 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.47■□□□□ 0.87
P01878 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01878 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01878 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
P01878 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01878 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01878 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01878 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01878 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
P01878 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
P01878 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
P01878 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
P01878 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms