Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01643 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.7■□□□□ 0.1
P01643 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.7■□□□□ 0.1
P01643 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01643 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.7■□□□□ 0.1
P01643 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
P01643 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01643 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P01643 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
P01643 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Gm7291-201ENSMUST00000199147 382 ntBASIC15.69■□□□□ 0.1
P01643 Gm42778-201ENSMUST00000199644 553 ntBASIC15.69■□□□□ 0.1
P01643 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.69■□□□□ 0.1
P01643 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01643 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.69■□□□□ 0.1
P01643 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
P01643 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
P01643 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
P01643 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.68■□□□□ 0.1
P01643 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.68■□□□□ 0.1
P01643 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01643 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.67■□□□□ 0.1
P01643 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.67■□□□□ 0.1
P01643 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01643 Gm18671-201ENSMUST00000214826 683 ntBASIC15.67■□□□□ 0.1
P01643 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01643 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01643 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01643 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.67■□□□□ 0.1
P01643 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01643 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
P01643 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
P01643 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
P01643 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P01643 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P01643 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
P01643 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
P01643 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
P01643 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.66■□□□□ 0.1
P01643 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.66■□□□□ 0.1
P01643 Gm27405-201ENSMUST00000184201 112 ntBASIC15.66■□□□□ 0.1
P01643 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.66■□□□□ 0.1
P01643 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Gm9988-201ENSMUST00000069786 435 ntBASIC15.66■□□□□ 0.1
P01643 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
P01643 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P01643 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P01643 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
P01643 Gm10849-201ENSMUST00000100397 618 ntBASIC15.65■□□□□ 0.1
P01643 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P01643 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P01643 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
P01643 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.64■□□□□ 0.09
P01643 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.64■□□□□ 0.09
P01643 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
P01643 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.64■□□□□ 0.09
P01643 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
P01643 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P01643 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P01643 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.63■□□□□ 0.09
P01643 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01643 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01643 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01643 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
P01643 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms