Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mtco1P00397 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mtco1P00397 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Mtco1P00397 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Reep4-203ENSMUST00000226563 1444 ntBASIC21.65■■□□□ 1.06
Mtco1P00397 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Mtco1P00397 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.65■■□□□ 1.06
Mtco1P00397 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.65■■□□□ 1.06
Mtco1P00397 Gm27801-201ENSMUST00000184174 223 ntBASIC21.65■■□□□ 1.06
Mtco1P00397 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.65■■□□□ 1.06
Mtco1P00397 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Mtco1P00397 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Mtco1P00397 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mtco1P00397 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Mtco1P00397 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Mtco1P00397 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.06
Mtco1P00397 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.64■■□□□ 1.05
Mtco1P00397 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Mtco1P00397 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Mtco1P00397 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Mtco1P00397 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Mtco1P00397 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mtco1P00397 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mtco1P00397 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Mtco1P00397 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mtco1P00397 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Mtco1P00397 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.64■■□□□ 1.05
Mtco1P00397 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mtco1P00397 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mtco1P00397 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mtco1P00397 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mtco1P00397 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Mtco1P00397 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mtco1P00397 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.63■■□□□ 1.05
Mtco1P00397 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mtco1P00397 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mtco1P00397 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mtco1P00397 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mtco1P00397 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mtco1P00397 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Mtco1P00397 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mtco1P00397 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mtco1P00397 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mtco1P00397 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.62■■□□□ 1.05
Mtco1P00397 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mtco1P00397 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Mtco1P00397 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mtco1P00397 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mtco1P00397 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mtco1P00397 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mtco1P00397 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mtco1P00397 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Mtco1P00397 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.61■■□□□ 1.05
Mtco1P00397 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Mtco1P00397 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mtco1P00397 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mtco1P00397 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mtco1P00397 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mtco1P00397 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Mtco1P00397 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mtco1P00397 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mtco1P00397 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mtco1P00397 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Mtco1P00397 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.59■■□□□ 1.05
Mtco1P00397 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mtco1P00397 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Mtco1P00397 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.59■■□□□ 1.05
Mtco1P00397 Gm13234-201ENSMUST00000120010 747 ntBASIC21.59■■□□□ 1.05
Mtco1P00397 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.59■■□□□ 1.05
Mtco1P00397 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.59■■□□□ 1.05
Mtco1P00397 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mtco1P00397 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.59■■□□□ 1.05
Mtco1P00397 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Mtco1P00397 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Mtco1P00397 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Mtco1P00397 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Mtco1P00397 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Mtco1P00397 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Mtco1P00397 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Mtco1P00397 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Mtco1P00397 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Mtco1P00397 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
Mtco1P00397 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.57■■□□□ 1.04
Mtco1P00397 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mtco1P00397 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mtco1P00397 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mtco1P00397 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Mtco1P00397 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mtco1P00397 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mtco1P00397 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Mtco1P00397 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Mtco1P00397 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms