Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a20bO88575 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.73■■□□□ 1.07
Slc6a20bO88575 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.73■■□□□ 1.07
Slc6a20bO88575 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.73■■□□□ 1.07
Slc6a20bO88575 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a20bO88575 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a20bO88575 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a20bO88575 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a20bO88575 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a20bO88575 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a20bO88575 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a20bO88575 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a20bO88575 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a20bO88575 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a20bO88575 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a20bO88575 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a20bO88575 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a20bO88575 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.71■■□□□ 1.07
Slc6a20bO88575 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a20bO88575 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a20bO88575 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a20bO88575 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a20bO88575 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a20bO88575 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a20bO88575 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Gm37856-201ENSMUST00000191634 999 ntBASIC21.7■■□□□ 1.06
Slc6a20bO88575 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a20bO88575 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a20bO88575 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a20bO88575 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a20bO88575 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a20bO88575 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.69■■□□□ 1.06
Slc6a20bO88575 Gm10812-201ENSMUST00000099864 546 ntBASIC21.69■■□□□ 1.06
Slc6a20bO88575 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.69■■□□□ 1.06
Slc6a20bO88575 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Slc6a20bO88575 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.69■■□□□ 1.06
Slc6a20bO88575 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a20bO88575 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a20bO88575 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a20bO88575 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a20bO88575 Gm6420-201ENSMUST00000193885 723 ntBASIC21.68■■□□□ 1.06
Slc6a20bO88575 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a20bO88575 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.68■■□□□ 1.06
Slc6a20bO88575 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a20bO88575 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a20bO88575 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Gm7977-201ENSMUST00000193787 748 ntBASIC21.67■■□□□ 1.06
Slc6a20bO88575 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a20bO88575 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a20bO88575 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a20bO88575 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a20bO88575 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a20bO88575 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a20bO88575 Mir6982-201ENSMUST00000184354 68 ntBASIC21.66■■□□□ 1.06
Slc6a20bO88575 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Slc6a20bO88575 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a20bO88575 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a20bO88575 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a20bO88575 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.65■■□□□ 1.06
Slc6a20bO88575 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a20bO88575 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.65■■□□□ 1.06
Slc6a20bO88575 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.65■■□□□ 1.06
Slc6a20bO88575 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a20bO88575 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a20bO88575 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a20bO88575 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
Slc6a20bO88575 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a20bO88575 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc6a20bO88575 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a20bO88575 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms