Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cldn1O88551 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.86■□□□□ 0.29
Cldn1O88551 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cldn1O88551 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cldn1O88551 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cldn1O88551 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldn1O88551 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldn1O88551 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldn1O88551 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldn1O88551 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cldn1O88551 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.84■□□□□ 0.29
Cldn1O88551 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Gm10653-202ENSMUST00000139570 835 ntBASIC16.84■□□□□ 0.29
Cldn1O88551 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cldn1O88551 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.84■□□□□ 0.29
Cldn1O88551 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.84■□□□□ 0.29
Cldn1O88551 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.84■□□□□ 0.29
Cldn1O88551 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.84■□□□□ 0.29
Cldn1O88551 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.84■□□□□ 0.29
Cldn1O88551 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Cldn1O88551 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cldn1O88551 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.84■□□□□ 0.29
Cldn1O88551 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cldn1O88551 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn1O88551 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cldn1O88551 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn1O88551 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn1O88551 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cldn1O88551 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn1O88551 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn1O88551 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn1O88551 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn1O88551 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn1O88551 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn1O88551 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cldn1O88551 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cldn1O88551 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn1O88551 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cldn1O88551 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
Cldn1O88551 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn1O88551 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cldn1O88551 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn1O88551 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.81■□□□□ 0.28
Cldn1O88551 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn1O88551 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cldn1O88551 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.81■□□□□ 0.28
Cldn1O88551 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn1O88551 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn1O88551 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn1O88551 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn1O88551 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.81■□□□□ 0.28
Cldn1O88551 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn1O88551 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn1O88551 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn1O88551 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.8■□□□□ 0.28
Cldn1O88551 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn1O88551 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn1O88551 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.8■□□□□ 0.28
Cldn1O88551 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.8■□□□□ 0.28
Cldn1O88551 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.8■□□□□ 0.28
Cldn1O88551 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cldn1O88551 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cldn1O88551 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn1O88551 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn1O88551 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn1O88551 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn1O88551 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn1O88551 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn1O88551 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cldn1O88551 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.79■□□□□ 0.28
Cldn1O88551 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.79■□□□□ 0.28
Cldn1O88551 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cldn1O88551 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms