Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tulp3O88413 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.38■□□□□ 0.53
Tulp3O88413 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Tulp3O88413 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tulp3O88413 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tulp3O88413 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tulp3O88413 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tulp3O88413 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tulp3O88413 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tulp3O88413 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.37■□□□□ 0.53
Tulp3O88413 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.37■□□□□ 0.53
Tulp3O88413 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.37■□□□□ 0.53
Tulp3O88413 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tulp3O88413 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tulp3O88413 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tulp3O88413 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tulp3O88413 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tulp3O88413 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tulp3O88413 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tulp3O88413 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.36■□□□□ 0.53
Tulp3O88413 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tulp3O88413 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tulp3O88413 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.36■□□□□ 0.53
Tulp3O88413 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.36■□□□□ 0.53
Tulp3O88413 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tulp3O88413 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Tulp3O88413 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tulp3O88413 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tulp3O88413 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.36■□□□□ 0.53
Tulp3O88413 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tulp3O88413 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tulp3O88413 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tulp3O88413 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.35■□□□□ 0.53
Tulp3O88413 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tulp3O88413 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tulp3O88413 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tulp3O88413 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tulp3O88413 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tulp3O88413 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tulp3O88413 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tulp3O88413 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tulp3O88413 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tulp3O88413 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.34■□□□□ 0.53
Tulp3O88413 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tulp3O88413 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Tulp3O88413 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tulp3O88413 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tulp3O88413 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tulp3O88413 Gm43566-201ENSMUST00000196851 808 ntBASIC18.33■□□□□ 0.52
Tulp3O88413 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.33■□□□□ 0.52
Tulp3O88413 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tulp3O88413 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tulp3O88413 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tulp3O88413 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tulp3O88413 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tulp3O88413 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tulp3O88413 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tulp3O88413 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tulp3O88413 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tulp3O88413 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.32■□□□□ 0.52
Tulp3O88413 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.32■□□□□ 0.52
Tulp3O88413 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tulp3O88413 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Tulp3O88413 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tulp3O88413 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tulp3O88413 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tulp3O88413 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tulp3O88413 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tulp3O88413 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Tulp3O88413 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tulp3O88413 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.31■□□□□ 0.52
Tulp3O88413 Mir6236-201ENSMUST00000184437 123 ntBASIC18.31■□□□□ 0.52
Tulp3O88413 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tulp3O88413 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tulp3O88413 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tulp3O88413 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tulp3O88413 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.3■□□□□ 0.52
Tulp3O88413 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tulp3O88413 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tulp3O88413 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tulp3O88413 Gm13238-201ENSMUST00000117655 780 ntBASIC18.3■□□□□ 0.52
Tulp3O88413 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tulp3O88413 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tulp3O88413 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tulp3O88413 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tulp3O88413 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.3■□□□□ 0.52
Tulp3O88413 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tulp3O88413 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tulp3O88413 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tulp3O88413 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tulp3O88413 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms